Heatmap: Cluster_101 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
1.0 0.25 1.17 1.13 0.87 0.72 1.28 -0.17 -0.63 -2.21 -1.03 1.71 -0.18 -0.22 -0.29 -0.8 -0.91 -0.88 -1.36 0.16 -0.13 -0.7 -0.15 -0.55 -1.47 -0.64 -0.38 0.1 -0.25 -1.44 -0.24 -0.56 -1.38 -1.13 -0.23 -0.84 -0.95 -0.12 -0.9 -0.86 -0.4 0.19 -0.14 0.24 -0.61 -0.56 1.84 -0.19
0.04 -0.04 1.05 1.18 0.62 -0.94 0.96 -5.37 -6.34 -7.54 -6.88 - -3.27 -0.18 -1.24 -0.07 -0.02 -0.71 -0.62 -0.1 0.07 -0.79 -0.8 -0.3 -0.19 -0.43 0.66 -0.11 0.04 -0.2 -0.47 -0.17 -0.6 -0.03 -0.86 -0.94 0.63 -0.04 0.52 -4.68 -2.53 1.72 0.19 -0.94 -0.93 0.37 2.88 -1.38
0.7 0.3 1.9 1.81 1.58 0.28 1.78 -2.07 -3.18 -3.47 -4.11 -9.67 -3.48 -0.47 -0.07 -0.63 -1.08 -1.32 -1.25 0.39 -0.01 -0.65 -0.24 -0.28 -1.81 -0.62 -1.48 1.5 0.34 -1.78 -0.18 -0.9 -0.84 -1.12 -0.15 -1.1 -0.34 -0.18 -0.67 -2.09 -5.29 -1.45 -0.39 1.19 -0.52 -3.73 2.05 0.1
-0.38 -0.18 -10.03 -7.19 -6.52 -5.89 -8.33 - - -11.07 - - - -1.32 0.11 -1.05 -2.31 -1.0 -3.36 0.38 1.62 -1.7 -2.92 -3.44 -2.01 -4.33 1.8 -8.44 -4.87 -8.75 -1.76 -0.19 -1.4 0.74 -2.75 -0.86 2.0 -0.41 0.14 -2.34 -0.17 1.89 1.41 0.46 1.77 -6.13 3.46 0.83
1.25 -0.28 1.28 1.33 0.97 -0.07 1.4 -1.63 -1.1 -2.68 -1.68 1.36 -1.68 -0.62 -1.1 -0.94 -0.82 -0.96 -0.8 -0.05 -0.94 -0.58 -0.1 -1.1 -1.13 -1.23 -0.67 0.35 0.91 -1.21 -0.22 -0.19 -0.49 -0.48 0.03 -0.91 -0.58 -0.63 -0.54 -0.8 0.72 -1.0 -0.81 0.14 -0.15 1.08 1.66 -0.06
AT1G08030 (TPST)
-0.19 0.43 0.04 -0.09 -0.23 0.12 -0.16 0.73 1.63 1.45 2.02 -1.81 -1.16 -0.21 0.09 -0.7 -0.33 -0.68 0.57 0.05 -0.32 -1.2 -0.71 -0.68 -2.13 -0.7 -0.26 -0.79 -1.15 -2.26 -0.37 -0.94 -1.21 -0.48 -0.32 -0.56 0.17 -0.25 -0.58 -2.35 -1.0 -0.95 0.33 0.15 -0.7 -0.25 2.14 -0.32
AT1G11400 (PYM)
-0.73 0.57 0.45 0.15 0.34 0.12 0.19 -0.41 -0.07 -0.6 -0.0 -8.15 -2.71 -0.52 0.6 -1.27 -0.74 -1.75 -0.52 0.47 -1.28 -1.24 -0.14 -1.1 -0.77 -1.39 -0.8 0.85 0.9 -0.74 -0.62 0.35 -0.46 0.18 0.3 -1.48 -0.73 -0.01 0.01 -0.93 -0.83 0.43 0.42 0.54 -0.63 1.68 2.33 -0.51
AT1G11760 (MED32)
0.59 0.71 0.66 0.26 0.39 -0.42 0.36 -2.58 -3.03 -3.71 -3.56 -3.57 -4.13 -0.47 -0.35 -0.21 -0.09 -0.28 -0.19 1.53 0.27 -0.02 0.23 0.15 0.5 -0.37 -0.46 0.08 -0.54 -0.01 1.28 0.31 -1.05 -0.88 1.13 0.24 0.48 -0.35 -1.05 -5.59 -4.64 -0.72 -1.07 0.06 -0.33 -0.22 2.31 -0.75
AT1G14510 (AL7)
-0.56 0.7 1.19 1.06 0.98 0.17 1.04 -2.22 -3.52 -4.86 -5.23 -9.09 -2.11 0.15 -0.38 -0.57 -0.07 -0.73 -0.88 0.89 -0.11 -0.46 0.16 -0.41 -0.96 -0.88 -0.49 1.01 -0.29 -0.91 0.24 0.34 -0.6 -0.26 0.93 -0.77 0.06 0.11 0.19 -3.13 -1.04 -0.06 0.11 0.72 0.08 0.37 1.53 0.23
0.21 -0.28 1.86 2.1 1.88 1.83 2.02 0.55 0.45 -0.06 0.22 -3.05 0.54 -0.81 -0.76 -1.42 -1.65 -1.12 0.14 0.03 -0.21 -0.92 -0.67 -0.3 -5.06 -0.78 -3.19 0.55 0.87 -5.29 0.17 -1.97 -3.29 -3.39 -0.71 -0.99 -4.81 -1.01 -5.09 -3.18 -4.05 -0.32 -0.56 -0.9 -2.08 - 1.58 -1.7
AT1G28560 (SRD2)
-0.05 -0.02 1.24 1.31 0.94 0.33 1.42 2.54 1.91 0.41 0.5 -4.28 0.16 -0.7 0.68 -0.76 -1.47 -2.45 0.49 -0.87 -1.45 -0.6 -0.74 -1.11 -0.88 -0.89 -0.25 -0.21 -1.17 -0.86 -1.17 -0.44 -1.27 -1.34 -1.05 -1.35 -0.13 -0.8 -0.92 -4.43 - -1.08 -0.41 0.26 -1.16 - 1.19 -0.68
AT1G34780 (APRL4)
-1.76 0.04 0.44 0.35 0.57 0.62 0.59 1.24 1.14 1.34 1.08 -2.93 -0.52 -0.26 0.19 -0.18 -0.39 -0.44 0.81 0.29 -0.09 -0.1 -0.21 -0.62 -1.1 -0.55 0.01 -0.77 -1.51 -1.02 -0.2 -0.67 -0.78 -0.87 -0.61 -0.77 -0.25 -0.29 -0.13 -3.99 1.21 -1.3 -0.82 -0.44 -1.23 -1.97 1.83 -1.29
AT1G51190 (PLT2)
- -9.86 -0.39 -0.22 -1.24 -3.91 -0.68 - -7.91 -7.88 -7.58 -7.23 -6.0 -8.42 - -8.55 - - -4.57 -9.41 - - - -2.3 -2.75 -4.45 -7.41 1.16 -2.03 -4.07 -4.17 -0.53 -2.87 -2.93 -9.41 - -7.42 -2.56 - - - -4.54 -1.61 3.38 1.07 - 4.62 1.79
AT1G69040 (ACR4)
-2.59 0.31 -0.53 -0.65 -1.37 -3.63 -0.81 -9.84 -8.62 -7.44 -8.02 -12.13 -8.09 1.35 1.58 -0.82 1.98 1.52 -2.08 0.71 -0.9 0.11 1.32 -2.61 -3.1 -2.66 -1.72 -0.2 -2.36 -4.96 0.08 -0.42 -0.6 -0.01 0.46 -1.12 -2.04 -0.1 -1.94 -2.5 -3.42 -1.66 1.12 1.45 0.23 2.54 1.11 1.06
-0.65 0.9 0.03 -0.67 0.08 1.23 0.01 1.33 0.42 -0.27 -0.67 -5.66 0.71 0.57 -0.01 0.01 0.43 0.1 0.39 0.44 0.56 0.15 -0.04 -0.04 -3.33 -0.6 -0.16 -0.91 -0.7 -3.93 0.31 -0.7 -0.71 -0.11 -0.02 0.3 0.21 0.19 -0.03 -2.62 - -0.67 -0.5 0.12 -1.4 -0.68 1.72 -0.44
0.28 -0.02 1.1 1.05 1.06 0.97 1.32 0.32 0.03 -0.52 -0.65 2.76 -1.15 -0.2 -0.39 -1.14 -0.61 -0.12 -0.45 -0.43 -0.15 -1.0 -0.86 -0.62 -2.26 -0.98 -0.69 -0.28 -0.42 -2.36 -0.01 -0.79 -1.09 -0.55 -0.17 -0.77 -1.06 -0.57 -0.99 -3.75 -2.39 -1.15 0.02 -0.67 -0.92 0.22 1.5 -0.69
AT2G46990 (IAA20)
-3.92 -1.95 - - - - - - - - - - - -0.38 -1.46 -1.07 -3.55 - -6.47 -1.77 -2.89 -2.52 -1.94 -0.87 -4.29 -1.48 - 0.85 -1.23 -4.01 -2.44 1.84 -1.6 3.51 0.29 -2.91 -2.99 0.94 -6.61 - - - -5.17 0.8 -2.15 - 4.35 -0.71
AT3G12060 (TBL1)
-2.2 -0.67 -3.63 -3.37 -2.97 -3.14 -4.12 -1.38 -1.57 -0.97 -1.67 4.45 1.12 -3.73 -1.57 -3.26 -5.98 -6.23 -1.36 -0.2 -4.55 -3.42 -2.2 -1.37 -7.61 -2.86 -8.33 2.57 1.38 -5.74 -1.59 -3.06 -3.59 -4.3 0.07 -3.67 -4.31 -1.12 -6.98 -5.42 - -5.62 -2.99 0.23 -1.72 - 2.51 -1.76
0.44 0.24 0.71 0.84 0.45 -0.73 0.6 -0.71 -2.09 -1.64 -2.41 2.98 -0.13 -0.58 0.24 -2.42 -3.09 -2.82 -1.08 0.61 -2.07 -0.04 1.05 -0.93 -3.26 -2.01 -4.93 0.9 0.46 -3.07 0.52 -0.73 -1.29 -1.94 1.33 0.48 -3.29 -0.09 -4.25 -4.41 -4.43 -1.34 -1.97 0.42 -0.23 -7.52 2.4 -0.73
0.73 0.63 0.89 0.92 0.67 0.33 1.06 -0.38 -0.5 -1.72 -0.68 2.6 -0.58 -0.18 -1.62 -0.54 0.26 0.04 -0.72 0.27 0.26 -0.83 -0.42 -0.11 -1.69 -0.25 -0.04 -0.9 0.21 -1.75 0.16 -0.61 -1.85 -0.68 -0.54 -0.03 -0.32 -0.42 -1.0 -5.06 -4.1 0.12 0.4 0.12 -0.3 -0.39 0.19 -0.35
-0.01 -0.96 -0.53 -2.14 -1.44 -2.66 -2.19 1.39 2.65 2.31 2.92 -2.2 -1.61 -0.91 0.6 -1.73 -0.82 -0.91 1.38 -0.93 -1.26 -1.59 -1.17 -0.97 -3.54 -0.98 -0.35 -0.75 -0.42 -5.81 -1.45 -1.22 -1.53 -1.37 -1.52 -0.52 -0.89 -1.4 -1.1 -2.81 -3.91 -0.65 0.45 -1.41 0.0 0.98 0.73 -0.54
AT3G27580 (ATPK7)
-1.99 -0.39 -1.54 -1.35 -1.37 -3.54 -1.36 -5.28 -5.44 -8.38 -6.72 -5.83 -5.52 0.14 -0.41 -1.46 0.78 0.26 -1.32 -0.21 -0.28 0.12 0.56 -1.1 -0.15 -0.66 -0.14 -0.31 -1.32 -0.71 -1.43 0.02 -0.55 0.71 -0.73 0.04 0.63 0.29 -1.48 -4.56 -0.09 0.71 1.58 1.89 1.43 0.55 2.96 0.09
2.36 0.66 -0.53 -0.42 -0.58 0.02 -0.25 -0.32 -0.43 -1.57 -1.16 3.54 -0.38 -0.41 -0.69 -0.86 -0.34 -1.38 -0.78 0.08 -1.33 -1.03 -0.44 -0.48 -4.85 -0.84 -1.84 -0.02 1.5 -6.59 0.48 -0.07 -2.04 -2.34 -0.17 -0.95 -1.79 -0.9 -3.42 -2.31 -5.85 -1.89 -2.73 -1.72 -3.57 - 2.2 -3.14
-5.34 -5.84 - - - - - - -7.01 - - -6.14 - -5.31 -5.57 -3.67 - - - -5.61 - -7.07 - -4.38 -5.97 -4.28 -3.34 -1.14 -4.24 -8.41 - -1.41 -1.79 0.06 -6.32 -3.02 -0.05 -2.16 -1.2 -3.0 - 3.01 0.46 1.68 0.95 - 4.81 -0.42
AT3G54220 (SCR)
-0.42 0.77 -2.17 -3.41 -2.18 -2.83 -3.27 -5.21 -7.23 -9.46 -9.08 -10.41 -6.99 -1.08 -0.35 -0.64 -1.07 -1.5 -3.06 0.32 -0.65 -0.17 -0.2 -1.09 -2.46 -1.02 -2.03 1.89 0.76 -4.05 0.27 0.16 -0.18 0.43 0.05 -2.05 -1.84 -0.26 -0.6 -4.04 -3.86 0.82 0.9 1.06 0.33 - 3.91 0.71
AT3G58460 (RBL15)
0.09 0.26 0.8 0.63 0.25 -0.71 0.67 -2.49 -3.19 -4.89 -4.28 -2.58 -1.44 -0.01 -1.73 -0.35 -0.02 -0.1 -1.58 0.26 -0.2 -0.44 -0.23 -0.18 -1.65 -0.26 0.07 -0.06 -0.64 -1.93 -0.01 -0.11 -0.78 -0.02 -0.13 0.38 -0.04 0.2 0.1 -1.89 -2.0 0.61 1.2 1.1 0.43 1.57 2.09 0.38
AT4G04860 (DER2.2)
0.28 0.17 0.91 1.1 0.96 0.87 1.13 0.16 0.09 -1.96 -0.81 -2.52 -0.86 0.01 -1.26 -0.6 -0.14 -0.55 -0.93 0.08 -0.5 -1.07 -0.62 -0.42 -1.92 -0.49 0.14 -0.08 -0.16 -2.14 -0.13 -0.51 -1.54 -0.16 0.02 -0.38 0.68 0.0 0.38 -1.15 -1.06 0.64 0.31 0.29 -0.09 0.26 1.8 -0.25
0.4 0.25 0.9 0.75 0.8 0.1 0.87 -2.15 -2.16 -2.68 -2.13 0.55 -1.79 0.22 0.3 -0.32 -0.21 -0.39 -0.76 0.48 0.05 -0.42 0.13 -0.24 -0.42 -0.57 0.18 0.17 -2.08 -0.21 0.41 0.17 -0.44 -0.03 0.54 -0.15 -0.05 0.05 0.1 -1.84 -2.33 -0.02 -0.15 0.82 -0.14 -1.69 1.71 0.22
AT4G30850 (HHP2)
-2.91 -2.27 -0.72 -1.4 -1.72 -1.93 -1.46 1.53 2.85 2.52 3.43 -1.71 -0.24 -0.82 -1.71 -4.45 -3.16 -3.38 1.34 -1.63 -0.64 -4.33 -3.05 -2.71 -5.01 -3.28 -1.81 -0.0 -1.06 -7.11 -3.14 -1.25 -2.87 -1.55 -0.83 -2.67 -4.63 -1.39 -3.33 -1.45 -2.49 0.45 -0.52 -0.5 -0.51 -6.89 2.12 -0.91
AT4G35520 (MLH3)
-0.29 1.35 0.84 0.49 0.54 -1.32 0.19 -2.68 -2.81 -3.75 -2.39 -1.07 -2.98 -0.45 -0.45 -1.03 -1.73 -2.04 -0.5 0.98 -0.63 -0.09 0.91 -0.76 -2.46 -1.74 -3.35 1.34 1.9 -2.06 0.81 -0.58 -0.78 -1.58 0.22 -0.76 -3.35 0.33 -2.56 -2.35 -2.79 -0.25 -0.87 1.67 -0.14 - 2.92 -0.1
-1.04 0.03 -2.0 -1.56 -1.4 -0.72 -1.34 -0.02 -0.19 -0.53 -0.56 -4.34 -1.08 0.38 -0.54 0.71 0.08 0.22 -0.07 0.19 0.38 -0.35 -0.19 0.21 0.9 0.47 1.55 -0.49 -0.34 0.68 0.08 -0.23 -0.82 -0.32 0.01 -0.14 1.01 0.24 0.18 -1.29 -0.06 0.43 -0.05 -0.1 -0.13 0.58 1.19 -0.78
-2.55 -1.21 -2.3 -2.96 -2.51 -1.43 -2.73 1.76 3.09 2.76 3.33 -5.29 -0.02 -1.11 -0.31 -1.48 -1.26 -1.91 1.89 -1.24 -1.11 -2.57 -2.42 -2.15 -4.38 -1.96 -0.22 -3.01 -2.57 -9.95 -2.46 -1.73 -1.82 -1.25 -1.96 -2.36 -0.51 -2.03 -0.36 -3.11 -4.27 -0.15 -1.09 -2.14 -1.82 -0.61 0.53 -2.64
AT5G05860 (UGT76C2)
2.38 -2.06 - -6.26 - - - - - - -6.73 - - -1.22 -1.64 -1.9 -2.44 -3.66 -2.73 -1.05 0.35 -4.95 -3.81 -2.06 -1.24 -3.21 -3.03 2.11 -1.67 -1.06 -4.15 1.62 0.8 2.44 1.03 -2.39 -2.14 0.04 0.04 1.19 -3.36 2.45 -2.24 1.36 0.3 - 2.58 -0.85
AT5G14000 (NAC084)
-1.11 0.4 - - -6.65 - -6.52 - - - -8.45 - - -0.01 -0.45 -3.22 -1.69 -1.21 -3.46 0.39 3.91 -5.78 -5.53 -2.16 -3.48 -2.89 -1.22 -0.04 -2.79 -5.67 0.0 0.27 -1.77 0.66 -3.98 -5.88 -2.36 -0.57 -1.24 - - 0.85 1.95 1.93 0.69 - 2.64 1.25
AT5G16690 (ORC3)
-1.69 0.48 0.1 0.88 -0.09 -1.8 0.78 -0.75 -3.12 -1.41 -3.59 3.69 0.93 -0.37 -1.04 -1.67 -2.58 -1.74 -1.02 0.49 -1.85 -0.4 0.63 -1.04 -4.0 -2.03 -4.65 1.14 -0.37 -4.01 0.58 -0.59 -1.3 -1.66 0.83 -0.49 -4.37 -0.28 -3.75 -4.85 -4.65 -1.41 -1.17 1.05 -0.2 - 1.41 0.27
-2.31 0.77 -0.68 -1.22 -2.26 -7.13 -2.16 -8.1 -7.44 -11.02 -8.48 - - 0.06 -0.33 -0.32 0.28 0.57 -1.48 0.86 -1.04 -0.01 0.27 0.1 -5.45 -0.32 -6.52 0.75 -2.19 -6.83 0.72 -0.5 -0.66 0.22 0.83 0.7 -2.07 0.09 -3.26 -1.35 -1.29 0.36 1.23 0.44 0.34 2.95 2.53 0.12
1.32 0.39 -0.58 -0.97 -1.59 -3.48 -0.98 - - -9.5 - - 0.23 0.1 0.82 -0.03 -0.15 -0.61 -0.91 -0.18 0.3 -1.09 -0.89 -0.0 1.16 -0.2 1.32 -0.79 0.76 1.25 -0.02 -0.06 -0.64 -0.23 -0.97 -0.31 1.4 0.2 0.19 -1.5 1.42 0.44 -0.86 -1.25 -1.39 0.46 1.82 -1.83
-0.12 0.48 -0.57 0.43 -0.03 0.23 0.17 -0.85 -0.68 -2.49 -1.42 -6.83 -2.75 -0.06 -0.05 -0.95 -0.02 -0.38 -1.07 0.38 -0.27 -0.47 -0.09 -0.19 -1.8 -0.28 -0.53 -0.11 1.68 -1.85 0.58 -0.18 -1.31 -0.71 0.46 0.13 -0.15 -0.47 -1.11 -1.47 -2.03 0.07 0.99 -0.05 0.45 1.57 2.27 0.31
0.51 -0.2 0.85 0.64 0.28 -0.34 0.58 -1.74 -1.25 -2.23 -1.62 2.09 -0.92 -0.21 -1.29 -0.67 -0.56 -0.88 -0.95 -0.05 -0.69 -0.81 -0.52 -0.58 -0.87 -0.62 -0.2 -0.25 1.61 -0.67 -0.4 -0.53 -0.96 -0.17 -0.15 -0.29 -0.22 -0.21 0.41 -0.58 1.64 0.64 0.34 -0.02 -0.55 -1.76 1.19 -0.83
-1.27 1.35 -0.91 0.42 - -1.97 0.97 - - - - - - 0.4 1.42 -2.88 -0.81 - -2.14 -2.12 - -2.21 -0.75 -1.61 - -2.74 -0.43 - -0.81 - -1.15 -1.95 -0.98 0.33 -2.4 -1.87 - -1.02 -1.11 -1.82 3.54 - -1.6 0.33 - 1.09 3.74 -1.68
-8.73 -7.76 -5.16 - -5.32 -3.6 -7.92 0.38 -0.4 -1.16 -0.41 -4.61 -5.33 -8.17 -3.72 -8.97 -8.16 -5.81 -3.33 -4.76 - - - -4.59 -6.64 -5.25 - -0.7 -2.99 -9.73 - 0.54 -2.68 -0.98 -9.7 - - -2.3 -10.79 -4.22 - 2.83 1.74 1.53 -0.23 2.36 4.37 0.12

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.