AT3G28480

Description : Oxoglutarate/iron-dependent oxygenase

Gene families : OG0000256 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000256_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G28480

Target	Alias	Description	ECC score	Gene Family Method
Als_g38007	No alias	prolyl hydroxylase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g41271	No alias	prolyl hydroxylase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g22895	AT-P4H-1	prolyl hydroxylase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g12255	No alias	prolyl hydroxylase & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.02G031300.1	Ceric.02G031300	prolyl hydroxylase & original description:...	0.03	OrthoFinder output from all 47 species
Cre10.g424900	No alias	Protein modification.hydroxylation.prolyl hydroxylase	0.01	OrthoFinder output from all 47 species
Cre14.g626200	No alias	Protein modification.hydroxylation.prolyl hydroxylase	0.02	OrthoFinder output from all 47 species
Gb_17171	AT-P4H-1	prolyl hydroxylase	0.03	OrthoFinder output from all 47 species
LOC_Os03g58880.1	LOC_Os03g58880	prolyl hydroxylase	0.02	OrthoFinder output from all 47 species
LOC_Os07g09630.1	LOC_Os07g09630	prolyl hydroxylase	0.02	OrthoFinder output from all 47 species
MA_1877g0010	No alias	prolyl hydroxylase	0.04	OrthoFinder output from all 47 species
Msp_g02420	No alias	prolyl hydroxylase & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g18586	No alias	prolyl hydroxylase & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g26623	No alias	prolyl hydroxylase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc04g081930.3.1	Solyc04g081930	prolyl hydroxylase	0.02	OrthoFinder output from all 47 species
Zm00001e011407_P001	Zm00001e011407	prolyl hydroxylase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005768	endosome	IDA	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005802	trans-Golgi network	IDA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009627	systemic acquired resistance	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	None	Extended
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	ISS	Interproscan
BP	GO:0018126	protein hydroxylation	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018208	peptidyl-proline modification	None	Extended
BP	GO:0018401	peptidyl-proline hydroxylation to 4-hydroxy-L-proline	ISS	Interproscan
BP	GO:0019511	peptidyl-proline hydroxylation	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034976	response to endoplasmic reticulum stress	RCA	Interproscan
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0051213	dioxygenase activity	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004633	phosphopantothenoylcysteine decarboxylase activity	IEP	HCCA
CC	GO:0005730	nucleolus	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006972	hyperosmotic response	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
MF	GO:0010181	FMN binding	IEP	HCCA
BP	GO:0015936	coenzyme A metabolic process	IEP	HCCA
BP	GO:0015937	coenzyme A biosynthetic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
BP	GO:0033865	nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	HCCA
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	HCCA
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	IEP	HCCA
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0042538	hyperosmotic salinity response	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003582	ShKT_dom	273	314
IPR005123	Oxoglu/Fe-dep_dioxygenase	143	260

External Links

No external refs found!

AT3G28480

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation