AT3G19020

Description : Leucine-rich repeat (LRR) family protein

Gene families : OG0000448 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G19020
Cluster	HCCA: Cluster_39

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00242570	evm_27.TU.AmTr_v1...	Pollen-specific leucine-rich repeat extensin-like...	0.07	OrthoFinder output from all 47 species
AMTR_s00029p00242610	evm_27.TU.AmTr_v1...	Pollen-specific leucine-rich repeat extensin-like...	0.04	OrthoFinder output from all 47 species
AT1G12040	LRX1	leucine-rich repeat/extensin 1	0.05	OrthoFinder output from all 47 species
AT4G13340	No alias	Leucine-rich repeat (LRR) family protein	0.08	OrthoFinder output from all 47 species
Aev_g18679	No alias	LRR-domain extensin & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g38511	No alias	LRR-domain extensin & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g21090	No alias	LRR-domain extensin & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g21238	LRX2	LRR-domain extensin & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene01034.t1	LRX2, Aspi01Gene01034	LRR-domain extensin & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene09207.t1	Aspi01Gene09207	LRR-domain extensin & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene53230.t1	LRX2, Aspi01Gene53230	LRR-domain extensin & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g03151	No alias	LRR-domain extensin & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g14018	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g14310	LRX2	LRR-domain extensin & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g55943	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.16G022500.1	Ceric.16G022500	LRR-domain extensin & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.17G055900.1	Ceric.17G055900	LRR-domain extensin & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g10806	LRX2	LRR-domain extensin & original description: none	0.05	OrthoFinder output from all 47 species
Dac_g36028	No alias	LRR-domain extensin & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g07517	No alias	LRR-domain extensin & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g15033	LRX2	LRR-domain extensin & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g46163	No alias	LRR-domain extensin & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g31890	LRX2	LRR-domain extensin & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01015276001	No alias	Leucine-rich repeat extensin-like protein 4...	0.03	OrthoFinder output from all 47 species
GSVIVT01031843001	No alias	Cell wall.cell wall proteins.hydroxyproline-rich...	0.09	OrthoFinder output from all 47 species
Gb_26318	No alias	LRR-domain extensin	0.05	OrthoFinder output from all 47 species
Gb_27021	LRX2	LRR-domain extensin	0.03	OrthoFinder output from all 47 species
LOC_Os01g25460.1	LOC_Os01g25460	LRR-domain extensin	0.09	OrthoFinder output from all 47 species
LOC_Os05g08770.2	LOC_Os05g08770	LRR-domain extensin	0.03	OrthoFinder output from all 47 species
LOC_Os12g35710.1	LOC_Os12g35710	LRR-domain extensin	0.05	OrthoFinder output from all 47 species
Len_g05367	LRX2	LRR-domain extensin & original description: none	0.03	OrthoFinder output from all 47 species
Mp8g04500.1	No alias	Leucine-rich repeat extensin-like protein 1...	0.04	OrthoFinder output from all 47 species
Msp_g39205	No alias	LRR-domain extensin & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g05430	LRX2	LRR-domain extensin & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g11374	LRX2	LRR-domain extensin & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g16811	No alias	LRR-domain extensin & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g11851	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g30505	No alias	LRR-domain extensin & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g40535	No alias	LRR-domain extensin & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g05847	LRX2	LRR-domain extensin & original description: none	0.03	OrthoFinder output from all 47 species
Smo81544	LRX2	Cell wall.cell wall proteins.hydroxyproline-rich...	0.03	OrthoFinder output from all 47 species
Solyc01g108900.4.1	Solyc01g108900	LRR-domain extensin	0.04	OrthoFinder output from all 47 species
Solyc07g053840.1.1	Solyc07g053840	LRR-domain extensin	0.03	OrthoFinder output from all 47 species
Solyc10g050110.1.1	Solyc10g050110	Uncharacterized protein At4g06744 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc12g006980.2.1	Solyc12g006980	LRR-domain extensin	0.06	OrthoFinder output from all 47 species
Solyc12g088950.3.1	Solyc12g088950	Pollen-specific leucine-rich repeat extensin-like...	0.04	OrthoFinder output from all 47 species
Spa_g05733	LRX2	LRR-domain extensin & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g09054	No alias	LRR-domain extensin & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g26188	No alias	LRR-domain extensin & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g33020	No alias	LRR-domain extensin & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e017627_P001	LRX2, Zm00001e017627	Pollen-specific leucine-rich repeat extensin-like...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005199	structural constituent of cell wall	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009860	pollen tube growth	RCA	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040007	growth	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001558	regulation of cell growth	IEP	HCCA
BP	GO:0002238	response to molecule of fungal origin	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005794	Golgi apparatus	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006071	glycerol metabolic process	IEP	HCCA
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	HCCA
MF	GO:0008889	glycerophosphodiester phosphodiesterase activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
BP	GO:0009827	plant-type cell wall modification	IEP	HCCA
BP	GO:0009832	plant-type cell wall biogenesis	IEP	HCCA
BP	GO:0009846	pollen germination	IEP	HCCA
BP	GO:0010093	specification of floral organ identity	IEP	HCCA
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016759	cellulose synthase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
BP	GO:0019400	alditol metabolic process	IEP	HCCA
BP	GO:0019751	polyol metabolic process	IEP	HCCA
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	HCCA
BP	GO:0022604	regulation of cell morphogenesis	IEP	HCCA
BP	GO:0030029	actin filament-based process	IEP	HCCA
BP	GO:0030048	actin filament-based movement	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
CC	GO:0031225	obsolete anchored component of membrane	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
CC	GO:0042995	cell projection	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
CC	GO:0048046	apoplast	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051510	regulation of unidimensional cell growth	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0080092	regulation of pollen tube growth	IEP	HCCA
CC	GO:0090406	pollen tube	IEP	HCCA
BP	GO:0090701	specification of plant organ identity	IEP	HCCA
CC	GO:0120025	plasma membrane bounded cell projection	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT3G19020

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation