AT3G16640 (TCTP)

Aliases : TCTP

Description : translationally controlled tumor protein

Gene families : OG0002540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002540_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G16640
Cluster	HCCA: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method
Ala_g06075	TCTP	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g21661	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g09668	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g01960	TCTP	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01017723001	No alias	Translationally-controlled tumor protein homolog...	0.04	OrthoFinder output from all 47 species
LOC_Os11g43900.1	LOC_Os11g43900	Translationally-controlled tumor protein homolog...	0.12	OrthoFinder output from all 47 species
Len_g38315	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g36691	TCTP	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g12787	TCTP	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g06581	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g099770.3.1	Solyc01g099770	Translationally-controlled tumor protein homolog...	0.12	OrthoFinder output from all 47 species
Zm00001e013417_P002	TCTP, Zm00001e013417	Translationally-controlled tumor protein homolog OS=Zea...	0.04	OrthoFinder output from all 47 species
Zm00001e013418_P001	TCTP, Zm00001e013418	Translationally-controlled tumor protein homolog OS=Zea...	0.04	OrthoFinder output from all 47 species
Zm00001e013419_P001	TCTP, Zm00001e013419	Translationally-controlled tumor protein homolog OS=Zea...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0001558	regulation of cell growth	IMP	Interproscan
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISS	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007346	regulation of mitotic cell cycle	IMP	Interproscan
MF	GO:0008017	microtubule binding	IDA	Interproscan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008283	cell population proliferation	IMP	Interproscan
BP	GO:0009414	response to water deprivation	None	Extended
BP	GO:0009415	response to water	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009579	thylakoid	IDA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009734	auxin-activated signaling pathway	RCA	Interproscan
BP	GO:0009735	response to cytokinin	IDA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009791	post-embryonic development	IMP	Interproscan
BP	GO:0009819	drought recovery	IMP	Interproscan
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009860	pollen tube growth	IMP	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010119	regulation of stomatal movement	None	Extended
BP	GO:0010252	auxin homeostasis	IMP	Interproscan
BP	GO:0010638	positive regulation of organelle organization	None	Extended
MF	GO:0015631	tubulin binding	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031110	regulation of microtubule polymerization or depolymerization	None	Extended
BP	GO:0031112	positive regulation of microtubule polymerization or depolymerization	None	Extended
BP	GO:0031114	regulation of microtubule depolymerization	None	Extended
BP	GO:0031117	positive regulation of microtubule depolymerization	IMP	Interproscan
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032886	regulation of microtubule-based process	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0040014	regulation of multicellular organism growth	IMP	Interproscan
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0042742	defense response to bacterium	IEP	Interproscan
CC	GO:0042995	cell projection	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043243	positive regulation of protein-containing complex disassembly	None	Extended
BP	GO:0043244	regulation of protein-containing complex disassembly	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046686	response to cadmium ion	IEP	Interproscan
CC	GO:0048046	apoplast	IDA	Interproscan
BP	GO:0048364	root development	IMP	Interproscan
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048527	lateral root development	IMP	Interproscan
BP	GO:0048528	post-embryonic root development	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048768	root hair cell tip growth	IMP	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051493	regulation of cytoskeleton organization	None	Extended
BP	GO:0051495	positive regulation of cytoskeleton organization	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070507	regulation of microtubule cytoskeleton organization	None	Extended
BP	GO:0090333	regulation of stomatal closure	IMP	Interproscan
CC	GO:0090406	pollen tube	IDA	Interproscan
BP	GO:0090696	post-embryonic plant organ development	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120025	plasma membrane bounded cell projection	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901879	regulation of protein depolymerization	None	Extended
BP	GO:1901881	positive regulation of protein depolymerization	None	Extended
BP	GO:1902903	regulation of supramolecular fiber organization	None	Extended
BP	GO:1902905	positive regulation of supramolecular fiber organization	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0009648	photoperiodism	IEP	HCCA
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
MF	GO:0031625	ubiquitin protein ligase binding	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
MF	GO:0044389	ubiquitin-like protein ligase binding	IEP	HCCA
BP	GO:0048573	photoperiodism, flowering	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR018105	Translational_control_tumour_p	1	164

External Links

No external refs found!

AT3G16640 (TCTP)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation