AT3G15270 (SPL5)

Aliases : SPL5

Description : squamosa promoter binding protein-like 5

Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G15270

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00047p00197010	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SBP...	0.04	OrthoFinder output from all 47 species
AMTR_s00106p00142470	SPL11,...	RNA biosynthesis.transcriptional activation.SBP...	0.03	OrthoFinder output from all 47 species
AMTR_s00106p00142740	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AT5G43270	SPL2	squamosa promoter binding protein-like 2	0.09	OrthoFinder output from all 47 species
Adi_g015319	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g015320	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g104940	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g112854	SPL10	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g08078	SPL8	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g38966	SPL2	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g06796	SPL3	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g08975	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g25947	SPL2	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g46708	SPL8	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g27599	AtSPL9, SPL9	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene14484.t1	SPL3, Aspi01Gene14484	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene23632.t1	SPL8, Aspi01Gene23632	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0147.g053031	SPL8	SBP-type transcription factor & original description: CDS=1-2847	0.03	OrthoFinder output from all 47 species
Azfi_s1185.g099051	No alias	not classified & original description: CDS=1-531	0.06	OrthoFinder output from all 47 species
Cba_g10833	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g34343	AtSPL9, SPL9	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g75896	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cre02.g104700	SPL2	RNA biosynthesis.transcriptional activation.SBP...	0.04	OrthoFinder output from all 47 species
Dac_g16262	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g12554	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g18037	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g36276	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g48516	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g48961	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g08477	AtSPL9, SPL9	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g18256	SPL3	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g22348	AtSPL9, SPL9	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g22823	SPL8	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g23320	SPL2	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g04651	SPL3	SBP-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g05026	SPL8	SBP-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g09070	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01018204001	No alias	RNA biosynthesis.transcriptional activation.SBP...	0.04	OrthoFinder output from all 47 species
Gb_38013	SPL2	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Gb_38014	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os01g69830.1	SPL13, SPL13A,...	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
LOC_Os02g04680.1	SPL2, LOC_Os02g04680	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
LOC_Os02g08070.1	SPL8, LOC_Os02g08070	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
LOC_Os04g46580.1	SPL3, LOC_Os04g46580	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
LOC_Os04g56170.1	SPL8, LOC_Os04g56170	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
LOC_Os06g44860.1	SPL8, LOC_Os06g44860	transcription factor (SBP)	0.05	OrthoFinder output from all 47 species
LOC_Os08g39890.1	AtSPL9, SPL9,...	transcription factor (SBP)	0.05	OrthoFinder output from all 47 species
LOC_Os09g31438.1	AtSPL9, SPL9,...	transcription factor (SBP)	0.06	OrthoFinder output from all 47 species
Len_g17980	SPL12	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g05547	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g14940	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g17821	SPL3	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
MA_10429891g0020	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_22749g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_3179g0020	SPL8	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
MA_92489g0010	SPL2	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Mp1g10020.1	SPL8	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
Mp1g10030.1	SPL2	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Msp_g12140	SPL2	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g13816	SPL2	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g43554	SPL8	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g37276	SPL10	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g49101	SPL7, ATSPL7	regulatory protein *(SPL7) of copper homeostasis &...	0.03	OrthoFinder output from all 47 species
Ppi_g63266	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006256	SPL2	SBP-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025410	No alias	SBP-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0267.g026971	SPL8	SBP-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sam_g48834	No alias	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g090730.3.1	SPL8, Solyc01g090730	transcription factor (SBP)	0.07	OrthoFinder output from all 47 species
Solyc02g077920.4.1	SPL3, Solyc02g077920	transcription factor (SBP)	0.08	OrthoFinder output from all 47 species
Solyc07g062980.4.1	SPL3, Solyc07g062980	transcription factor (SBP)	0.06	OrthoFinder output from all 47 species
Solyc10g018780.3.1	SPL8, Solyc10g018780	transcription factor (SBP)	0.05	OrthoFinder output from all 47 species
Spa_g13068	AtSPL9, SPL9	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g18018	SPL8	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g08757	SPL4	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e006686_P001	SPL8, Zm00001e006686	transcription factor (SBP)	0.07	OrthoFinder output from all 47 species
Zm00001e013795_P002	SPL8, Zm00001e013795	transcription factor (SBP)	0.09	OrthoFinder output from all 47 species
Zm00001e021962_P003	SPL13, SPL13A,...	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
Zm00001e025110_P001	SPL8, Zm00001e025110	transcription factor (SBP)	0.1	OrthoFinder output from all 47 species
Zm00001e025234_P001	SPL2, Zm00001e025234	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Zm00001e034537_P001	AtSPL9, SPL9,...	transcription factor (SBP)	0.05	OrthoFinder output from all 47 species
Zm00001e035060_P002	SPL4, Zm00001e035060	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Zm00001e041526_P001	SPL3, Zm00001e041526	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010321	regulation of vegetative phase change	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	IEP	HCCA
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	HCCA
BP	GO:0001676	long-chain fatty acid metabolic process	IEP	HCCA
BP	GO:0002213	defense response to insect	IEP	HCCA
BP	GO:0003002	regionalization	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
BP	GO:0009556	microsporogenesis	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
BP	GO:0009741	response to brassinosteroid	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009826	unidimensional cell growth	IEP	HCCA
BP	GO:0009827	plant-type cell wall modification	IEP	HCCA
BP	GO:0009835	fruit ripening	IEP	HCCA
BP	GO:0009860	pollen tube growth	IEP	HCCA
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0009908	flower development	IEP	HCCA
BP	GO:0009909	regulation of flower development	IEP	HCCA
BP	GO:0009911	positive regulation of flower development	IEP	HCCA
BP	GO:0009932	cell tip growth	IEP	HCCA
BP	GO:0009933	meristem structural organization	IEP	HCCA
BP	GO:0010022	meristem determinacy	IEP	HCCA
BP	GO:0010025	wax biosynthetic process	IEP	HCCA
BP	GO:0010051	xylem and phloem pattern formation	IEP	HCCA
BP	GO:0010074	maintenance of meristem identity	IEP	HCCA
BP	GO:0010076	maintenance of floral meristem identity	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
BP	GO:0010093	specification of floral organ identity	IEP	HCCA
BP	GO:0010143	cutin biosynthetic process	IEP	HCCA
BP	GO:0010166	wax metabolic process	IEP	HCCA
BP	GO:0010226	response to lithium ion	IEP	HCCA
BP	GO:0010229	inflorescence development	IEP	HCCA
BP	GO:0010305	leaf vascular tissue pattern formation	IEP	HCCA
BP	GO:0010311	lateral root formation	IEP	HCCA
BP	GO:0010582	floral meristem determinacy	IEP	HCCA
BP	GO:0010588	cotyledon vascular tissue pattern formation	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
MF	GO:0015297	antiporter activity	IEP	HCCA
MF	GO:0015645	fatty acid ligase activity	IEP	HCCA
BP	GO:0016049	cell growth	IEP	HCCA
MF	GO:0016405	CoA-ligase activity	IEP	HCCA
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	HCCA
MF	GO:0016878	acid-thiol ligase activity	IEP	HCCA
BP	GO:0019827	stem cell population maintenance	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
MF	GO:0031957	very long-chain fatty acid-CoA ligase activity	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0033037	polysaccharide localization	IEP	HCCA
BP	GO:0034293	sexual sporulation	IEP	HCCA
BP	GO:0040007	growth	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0043934	sporulation	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0046982	protein heterodimerization activity	IEP	HCCA
BP	GO:0048236	plant-type sporogenesis	IEP	HCCA
BP	GO:0048367	shoot system development	IEP	HCCA
BP	GO:0048440	carpel development	IEP	HCCA
BP	GO:0048441	petal development	IEP	HCCA
BP	GO:0048443	stamen development	IEP	HCCA
BP	GO:0048481	plant ovule development	IEP	HCCA
BP	GO:0048507	meristem development	IEP	HCCA
BP	GO:0048532	anatomical structure arrangement	IEP	HCCA
BP	GO:0048582	positive regulation of post-embryonic development	IEP	HCCA
BP	GO:0048588	developmental cell growth	IEP	HCCA
BP	GO:0048589	developmental growth	IEP	HCCA
BP	GO:0048608	reproductive structure development	IEP	HCCA
BP	GO:0048731	system development	IEP	HCCA
BP	GO:0048831	regulation of shoot system development	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0051094	positive regulation of developmental process	IEP	HCCA
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051321	meiotic cell cycle	IEP	HCCA
BP	GO:0052386	cell wall thickening	IEP	HCCA
BP	GO:0052543	callose deposition in cell wall	IEP	HCCA
BP	GO:0052545	callose localization	IEP	HCCA
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
BP	GO:0090567	reproductive shoot system development	IEP	HCCA
BP	GO:0090701	specification of plant organ identity	IEP	HCCA
BP	GO:0098727	maintenance of cell number	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA
BP	GO:1901568	fatty acid derivative metabolic process	IEP	HCCA
BP	GO:1901570	fatty acid derivative biosynthetic process	IEP	HCCA
BP	GO:2000241	regulation of reproductive process	IEP	HCCA
BP	GO:2000243	positive regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	63	136

External Links

No external refs found!

AT3G15270 (SPL5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation