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  5. AT3G11260

AT3G11260 (WOX5)


Aliases : WOX5

Description : WUSCHEL related homeobox 5


Gene families : OG0001319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G11260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00149750 WOX2,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AMTR_s00021p00189010 STIP, HB-3,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00181320 WOX3, PRS1, PRS,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AMTR_s00051p00020930 WOX4,... RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
AT1G46480 WOX4 WUSCHEL related homeobox 4 0.05 OrthoFinder output from all 47 species
AT2G28610 WOX3, PRS1, PRS Homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G18010 WOX1 WUSCHEL related homeobox 1 0.03 OrthoFinder output from all 47 species
AT5G46010 No alias Homeodomain-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g053615 STIP, HB-3, WOX9 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22693 STPL, WOX8 WOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49578.t1 STPL, WOX8,... WOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63553.t1 STPL, WOX8,... WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63553.t2 STPL, WOX8,... WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G009000.1 STIP, HB-3,... WOX-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G009200.1 STPL, WOX8,... WOX-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.19G069000.1 STPL, WOX8,... WOX-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.27G012000.1 WUS, PGA6, WUS1,... WOX-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g07674 PFS2, HOS9, WOX6 WOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g36553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g32131 STPL, WOX8 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g33241 STPL, WOX8 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50892 STIP, HB-3, WOX9 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29015 STPL, WOX8 WOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29650 STPL, WOX8 WOX-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009453001 WOX4 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
GSVIVT01018787001 WUS, PGA6, WUS1 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
Gb_29958 WOX1 transcription factor (WOX) 0.05 OrthoFinder output from all 47 species
LOC_Os01g62310.1 WOX2, LOC_Os01g62310 transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
LOC_Os04g56780.1 WUS, PGA6, WUS1,... transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
LOC_Os05g02730.1 WOX3, PRS1, PRS,... transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
LOC_Os05g48990.1 STIP, HB-3,... transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
LOC_Os12g01120.1 WOX3, PRS1, PRS,... transcription factor (WOX) 0.01 OrthoFinder output from all 47 species
MA_10344604g0010 STIP, HB-3, WOX9 transcription factor (WOX) 0.05 OrthoFinder output from all 47 species
MA_74653g0010 PFS2, HOS9, WOX6 transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
MA_747816g0010 STPL, WOX8 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
MA_8832398g0010 WOX2 transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
MA_921642g0010 WOX1 transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
Nbi_g11122 STIP, HB-3, WOX9 WOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014086 STPL, WOX8 WOX-type transcription factor & original description: CDS=1-2016 0.03 OrthoFinder output from all 47 species
Solyc02g077390.2.1 STIP, HB-3,... transcription factor (WOX) 0.02 OrthoFinder output from all 47 species
Solyc04g078650.4.1 WOX4, Solyc04g078650 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Spa_g29226 STPL, WOX8 WOX-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36523 STPL, WOX8 WOX-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006644_P002 WUS, PGA6, WUS1,... transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
Zm00001e009121_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
Zm00001e019245_P001 WOX5, Zm00001e019245 transcription factor (WOX) 0.01 OrthoFinder output from all 47 species
Zm00001e024169_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.05 OrthoFinder output from all 47 species
Zm00001e024170_P001 Zm00001e024170 WUSCHEL-related homeobox 3B OS=Zea mays... 0.05 OrthoFinder output from all 47 species
Zm00001e028720_P001 WOX5, Zm00001e028720 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species
Zm00001e028776_P002 WOX2, Zm00001e028776 transcription factor (WOX) 0.04 OrthoFinder output from all 47 species
Zm00001e029534_P001 WOX3, PRS1, PRS,... transcription factor (WOX) 0.05 OrthoFinder output from all 47 species
Zm00001e032433_P003 STIP, HB-3,... transcription factor (WOX) 0.05 OrthoFinder output from all 47 species
Zm00001e041785_P001 WOX4, Zm00001e041785 transcription factor (WOX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009733 response to auxin IEP Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
BP GO:0003002 regionalization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004708 MAP kinase kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
CC GO:0005663 DNA replication factor C complex IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008083 growth factor activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0008356 asymmetric cell division IEP HCCA
BP GO:0009403 toxin biosynthetic process IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
BP GO:0009643 photosynthetic acclimation IEP HCCA
BP GO:0009700 indole phytoalexin biosynthetic process IEP HCCA
BP GO:0009734 auxin-activated signaling pathway IEP HCCA
BP GO:0009742 brassinosteroid mediated signaling pathway IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009850 auxin metabolic process IEP HCCA
BP GO:0009851 auxin biosynthetic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009956 radial pattern formation IEP HCCA
BP GO:0010080 regulation of floral meristem growth IEP HCCA
BP GO:0010120 camalexin biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010492 maintenance of shoot apical meristem identity IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019209 kinase activator activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019827 stem cell population maintenance IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0022622 root system development IEP HCCA
MF GO:0030295 protein kinase activator activity IEP HCCA
MF GO:0030545 signaling receptor regulator activity IEP HCCA
MF GO:0030546 signaling receptor activator activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
BP GO:0035265 organ growth IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0043401 steroid hormone mediated signaling pathway IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0046217 indole phytoalexin metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0048018 receptor ligand activity IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051457 maintenance of protein location in nucleus IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0052314 phytoalexin metabolic process IEP HCCA
BP GO:0052315 phytoalexin biosynthetic process IEP HCCA
BP GO:0052317 camalexin metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0060771 phyllotactic patterning IEP HCCA
BP GO:0060772 leaf phyllotactic patterning IEP HCCA
BP GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
MF GO:0080043 quercetin 3-O-glucosyltransferase activity IEP HCCA
MF GO:0080044 quercetin 7-O-glucosyltransferase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098727 maintenance of cell number IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 22 82
No external refs found!