AT3G07780 (OBE1)

Aliases : OBE1

Description : Protein of unknown function (DUF1423)

Gene families : OG0000521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000521_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G07780
Cluster	HCCA: Cluster_73

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00028p00190780	OBE2,...	OBERON-like protein OS=Nicotiana benthamiana	0.03	OrthoFinder output from all 47 species
Adi_g066797	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g122453	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g52234	No alias	transcriptional co-regulator *(Oberon) & original...	0.03	OrthoFinder output from all 47 species
Aob_g21192	No alias	transcriptional co-regulator *(Oberon) & original...	0.03	OrthoFinder output from all 47 species
Aop_g12550	OBE2	transcriptional co-regulator *(Oberon) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene00658.t2	Aspi01Gene00658	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene72654.t1	Aspi01Gene72654	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0063.g035336	No alias	transcriptional co-regulator *(Oberon) & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0073.g037195	No alias	transcriptional co-regulator *(Oberon) & original...	0.03	OrthoFinder output from all 47 species
Cba_g19917	No alias	transcriptional co-regulator *(Oberon) & original...	0.03	OrthoFinder output from all 47 species
Ceric.22G032700.1	Ceric.22G032700	transcriptional co-regulator *(Oberon) & original...	0.02	OrthoFinder output from all 47 species
Dcu_g07773	No alias	transcriptional co-regulator *(Oberon) & original...	0.03	OrthoFinder output from all 47 species
Dde_g00775	OBE2	transcriptional co-regulator *(Oberon) & original...	0.03	OrthoFinder output from all 47 species
Dde_g24942	No alias	transcriptional co-regulator *(Oberon) & original...	0.02	OrthoFinder output from all 47 species
LOC_Os12g32980.1	OBE2, LOC_Os12g32980	OBERON-like protein OS=Nicotiana benthamiana...	0.03	OrthoFinder output from all 47 species
Len_g09574	OBE2	transcriptional co-regulator *(Oberon) & original...	0.03	OrthoFinder output from all 47 species
Lfl_g04752	OBE2	transcriptional co-regulator *(Oberon) & original...	0.02	OrthoFinder output from all 47 species
Mp1g16320.1	No alias	OBERON-like protein OS=Nicotiana benthamiana...	0.02	OrthoFinder output from all 47 species
Msp_g40697	OBE1	transcriptional co-regulator *(Oberon) & original...	0.02	OrthoFinder output from all 47 species
Ore_g04520	OBE2	transcriptional co-regulator *(Oberon) & original...	0.02	OrthoFinder output from all 47 species
Pir_g46379	OBE2	transcriptional co-regulator *(Oberon) & original...	0.03	OrthoFinder output from all 47 species
Pnu_g08364	OBE2	transcriptional co-regulator *(Oberon) & original...	0.03	OrthoFinder output from all 47 species
Pnu_g10255	OBE1	transcriptional co-regulator *(Oberon) & original...	0.02	OrthoFinder output from all 47 species
Pnu_g24330	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g27832	No alias	transcriptional co-regulator *(Oberon) & original...	0.03	OrthoFinder output from all 47 species
Sam_g36358	No alias	transcriptional co-regulator *(Oberon) & original...	0.02	OrthoFinder output from all 47 species
Spa_g08413	OBE1	transcriptional co-regulator *(Oberon) & original...	0.02	OrthoFinder output from all 47 species
Zm00001e000995_P002	Zm00001e000995	no description available(sp\|q10pc5\|tta1_orysj : 940.0)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009536	plastid	IDA	Interproscan
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	IGI	Interproscan
BP	GO:0010014	meristem initiation	None	Extended
BP	GO:0010071	root meristem specification	IGI	Interproscan
BP	GO:0010074	maintenance of meristem identity	None	Extended
BP	GO:0010078	maintenance of root meristem identity	IGI	Interproscan
BP	GO:0010468	regulation of gene expression	IGI	Interproscan
BP	GO:0010492	maintenance of shoot apical meristem identity	IGI	Interproscan
BP	GO:0016032	viral process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019827	stem cell population maintenance	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031347	regulation of defense response	IMP	Interproscan
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	TAS	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044000	movement in host	None	Extended
BP	GO:0044001	migration in host	None	Extended
BP	GO:0044403	biological process involved in symbiotic interaction	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046739	transport of virus in multicellular host	None	Extended
BP	GO:0046740	transport of virus in host, cell to cell	IMP	Interproscan
BP	GO:0046794	transport of virus	None	Extended
MF	GO:0046982	protein heterodimerization activity	TAS	Interproscan
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0048364	root development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0051701	biological process involved in interaction with host	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080022	primary root development	IGI	Interproscan
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0090421	embryonic meristem initiation	None	Extended
BP	GO:0098727	maintenance of cell number	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0000785	chromatin	IEP	HCCA
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	HCCA
BP	GO:0003002	regionalization	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003868	4-hydroxyphenylpyruvate dioxygenase activity	IEP	HCCA
MF	GO:0003878	ATP citrate synthase activity	IEP	HCCA
MF	GO:0004371	glycerone kinase activity	IEP	HCCA
MF	GO:0004753	saccharopine dehydrogenase activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005778	peroxisomal membrane	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
BP	GO:0006071	glycerol metabolic process	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006085	acetyl-CoA biosynthetic process	IEP	HCCA
BP	GO:0006401	RNA catabolic process	IEP	HCCA
BP	GO:0006402	mRNA catabolic process	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006487	protein N-linked glycosylation	IEP	HCCA
BP	GO:0006553	lysine metabolic process	IEP	HCCA
BP	GO:0006554	lysine catabolic process	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006625	protein targeting to peroxisome	IEP	HCCA
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006635	fatty acid beta-oxidation	IEP	HCCA
BP	GO:0006775	fat-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007031	peroxisome organization	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009062	fatty acid catabolic process	IEP	HCCA
BP	GO:0009068	aspartate family amino acid catabolic process	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
CC	GO:0009346	ATP-independent citrate lyase complex	IEP	HCCA
BP	GO:0009648	photoperiodism	IEP	HCCA
BP	GO:0009838	abscission	IEP	HCCA
BP	GO:0009954	proximal/distal pattern formation	IEP	HCCA
BP	GO:0010189	vitamin E biosynthetic process	IEP	HCCA
BP	GO:0010227	floral organ abscission	IEP	HCCA
BP	GO:0010236	plastoquinone biosynthetic process	IEP	HCCA
BP	GO:0010351	lithium ion transport	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0010638	positive regulation of organelle organization	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0015919	peroxisomal membrane transport	IEP	HCCA
BP	GO:0016042	lipid catabolic process	IEP	HCCA
BP	GO:0016054	organic acid catabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
BP	GO:0016558	protein import into peroxisome matrix	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	HCCA
MF	GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
BP	GO:0019395	fatty acid oxidation	IEP	HCCA
BP	GO:0019400	alditol metabolic process	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
BP	GO:0019477	L-lysine catabolic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
MF	GO:0030527	structural constituent of chromatin	IEP	HCCA
CC	GO:0031463	Cul3-RING ubiquitin ligase complex	IEP	HCCA
CC	GO:0031903	microbody membrane	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	HCCA
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	HCCA
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	HCCA
BP	GO:0034440	lipid oxidation	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
BP	GO:0035384	thioester biosynthetic process	IEP	HCCA
MF	GO:0035671	enone reductase activity	IEP	HCCA
BP	GO:0040020	regulation of meiotic nuclear division	IEP	HCCA
BP	GO:0042181	ketone biosynthetic process	IEP	HCCA
BP	GO:0042360	vitamin E metabolic process	IEP	HCCA
BP	GO:0042362	fat-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0043574	peroxisomal transport	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044242	cellular lipid catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0044282	small molecule catabolic process	IEP	HCCA
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0045787	positive regulation of cell cycle	IEP	HCCA
BP	GO:0045836	positive regulation of meiotic nuclear division	IEP	HCCA
BP	GO:0045927	positive regulation of growth	IEP	HCCA
BP	GO:0046395	carboxylic acid catabolic process	IEP	HCCA
BP	GO:0046440	L-lysine metabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
MF	GO:0046912	acyltransferase activity, acyl groups converted into alkyl on transfer	IEP	HCCA
MF	GO:0047130	saccharopine dehydrogenase (NADP+, L-lysine-forming) activity	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0048439	flower morphogenesis	IEP	HCCA
BP	GO:0048573	photoperiodism, flowering	IEP	HCCA
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0051445	regulation of meiotic cell cycle	IEP	HCCA
BP	GO:0051446	positive regulation of meiotic cell cycle	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0051783	regulation of nuclear division	IEP	HCCA
BP	GO:0051785	positive regulation of nuclear division	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0065002	intracellular protein transmembrane transport	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071616	acyl-CoA biosynthetic process	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0071806	protein transmembrane transport	IEP	HCCA
BP	GO:0072329	monocarboxylic acid catabolic process	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072662	protein localization to peroxisome	IEP	HCCA
BP	GO:0072663	establishment of protein localization to peroxisome	IEP	HCCA
BP	GO:0090068	positive regulation of cell cycle process	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
BP	GO:1901661	quinone metabolic process	IEP	HCCA
BP	GO:1901663	quinone biosynthetic process	IEP	HCCA
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	HCCA
BP	GO:2000243	positive regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR032535	Oberon_cc	414	542
IPR032881	Oberon_PHD	197	320

External Links

No external refs found!

AT3G07780 (OBE1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation