AT3G06120 (MUTE)

Aliases : MUTE

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Gene families : OG0000768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000768_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G06120

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00198780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000157.61	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.01	OrthoFinder output from all 47 species
Ehy_g30290	FMA	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os02g15760.1	SPCH, LOC_Os02g15760	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
MA_120602g0010	SPCH	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
MA_57244g0010	FMA	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
Ppi_g63346	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g07999	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Smo91359	FMA	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
Solyc03g007410.4.1	SPCH, Solyc03g007410	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
Zm00001e000161_P002	Zm00001e000161	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Zm00001e014279_P001	SPCH, Zm00001e014279	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
Zm00001e024824_P001	SPCH, Zm00001e024824	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
Zm00001e026696_P001	MUTE, Zm00001e026696	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
Zm00001e037075_P001	SPCH, Zm00001e037075	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009913	epidermal cell differentiation	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010374	stomatal complex development	IMP	Interproscan
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0030855	epithelial cell differentiation	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0090558	plant epidermis development	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004364	glutathione transferase activity	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006749	glutathione metabolic process	IEP	HCCA
BP	GO:0006865	amino acid transport	IEP	HCCA
BP	GO:0009404	toxin metabolic process	IEP	HCCA
BP	GO:0009407	toxin catabolic process	IEP	HCCA
BP	GO:0009704	de-etiolation	IEP	HCCA
BP	GO:0010243	response to organonitrogen compound	IEP	HCCA
BP	GO:0015711	organic anion transport	IEP	HCCA
BP	GO:0015804	neutral amino acid transport	IEP	HCCA
BP	GO:0015824	proline transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
BP	GO:0019748	secondary metabolic process	IEP	HCCA
BP	GO:0043434	response to peptide hormone	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0046942	carboxylic acid transport	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048528	post-embryonic root development	IEP	HCCA
BP	GO:0048585	negative regulation of response to stimulus	IEP	HCCA
BP	GO:0060416	response to growth hormone	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
BP	GO:0080148	negative regulation of response to water deprivation	IEP	HCCA
BP	GO:0080167	response to karrikin	IEP	HCCA
BP	GO:0090696	post-embryonic plant organ development	IEP	HCCA
BP	GO:0098754	detoxification	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA
BP	GO:1901652	response to peptide	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:2000070	regulation of response to water deprivation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011598	bHLH_dom	2	50

External Links

No external refs found!

AT3G06120 (MUTE)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation