AT3G04930

Description : DNA-binding storekeeper protein-related transcriptional regulator

Gene families : OG0003910 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003910_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G04930
Cluster	HCCA: Cluster_94

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00124580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.GeBP...	0.04	OrthoFinder output from all 47 species
GSVIVT01002959001	No alias	No description available	0.02	OrthoFinder output from all 47 species
Solyc05g051330.1.1	Solyc05g051330	transcription factor (GeBP)	0.04	OrthoFinder output from all 47 species
Solyc07g052750.1.1	Solyc07g052750	STOREKEEPER protein OS=Solanum tuberosum...	0.02	OrthoFinder output from all 47 species
Zm00001e001793_P001	Zm00001e001793	transcription factor (GeBP)	0.03	OrthoFinder output from all 47 species
Zm00001e005422_P001	Zm00001e005422	transcription factor (GeBP)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000306	obsolete extrinsic component of vacuolar membrane	IEP	HCCA
MF	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	IEP	HCCA
BP	GO:0001708	cell fate specification	IEP	HCCA
MF	GO:0003827	alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	IEP	HCCA
MF	GO:0004371	glycerone kinase activity	IEP	HCCA
MF	GO:0004416	hydroxyacylglutathione hydrolase activity	IEP	HCCA
MF	GO:0005217	intracellular ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0005221	intracellular cyclic nucleotide activated monoatomic cation channel activity	IEP	HCCA
MF	GO:0005223	intracellular cGMP-activated cation channel activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
MF	GO:0005262	calcium channel activity	IEP	HCCA
MF	GO:0005267	potassium channel activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
CC	GO:0005795	Golgi stack	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006071	glycerol metabolic process	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006487	protein N-linked glycosylation	IEP	HCCA
BP	GO:0006491	N-glycan processing	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006623	protein targeting to vacuole	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0008285	negative regulation of cell population proliferation	IEP	HCCA
MF	GO:0008375	acetylglucosaminyltransferase activity	IEP	HCCA
MF	GO:0008565	obsolete protein transporter activity	IEP	HCCA
MF	GO:0008800	beta-lactamase activity	IEP	HCCA
BP	GO:0009100	glycoprotein metabolic process	IEP	HCCA
BP	GO:0009636	response to toxic substance	IEP	HCCA
BP	GO:0009838	abscission	IEP	HCCA
BP	GO:0009880	embryonic pattern specification	IEP	HCCA
BP	GO:0009900	dehiscence	IEP	HCCA
BP	GO:0009911	positive regulation of flower development	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0010047	fruit dehiscence	IEP	HCCA
BP	GO:0010150	leaf senescence	IEP	HCCA
BP	GO:0010227	floral organ abscission	IEP	HCCA
BP	GO:0010351	lithium ion transport	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015085	calcium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
BP	GO:0015919	peroxisomal membrane transport	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016262	protein N-acetylglucosaminyltransferase activity	IEP	HCCA
BP	GO:0016558	protein import into peroxisome matrix	IEP	HCCA
MF	GO:0016790	thiolester hydrolase activity	IEP	HCCA
MF	GO:0016812	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides	IEP	HCCA
BP	GO:0019400	alditol metabolic process	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
MF	GO:0030551	cyclic nucleotide binding	IEP	HCCA
CC	GO:0031984	organelle subcompartment	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0033365	protein localization to organelle	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0042744	hydrogen peroxide catabolic process	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
MF	GO:0043855	cyclic nucleotide-gated monoatomic ion channel activity	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0048582	positive regulation of post-embryonic development	IEP	HCCA
BP	GO:0051094	positive regulation of developmental process	IEP	HCCA
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0072594	establishment of protein localization to organelle	IEP	HCCA
BP	GO:0072665	protein localization to vacuole	IEP	HCCA
BP	GO:0072666	establishment of protein localization to vacuole	IEP	HCCA
BP	GO:0090421	embryonic meristem initiation	IEP	HCCA
BP	GO:0090693	plant organ senescence	IEP	HCCA
CC	GO:0098791	Golgi apparatus subcompartment	IEP	HCCA
MF	GO:0099094	ligand-gated monoatomic cation channel activity	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	HCCA
BP	GO:2000243	positive regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007592	GEBP	138	234

External Links

No external refs found!

AT3G04930

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation