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  5. AT3G02260

AT3G02260 (DOC1, ASA1, UMB1,...)


Aliases : DOC1, ASA1, UMB1, LPR1, TIR3, CRM1, BIG

Description : auxin transport protein (BIG)


Gene families : OG0002424 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G02260
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248360 DOC1, ASA1,... Phytohormones.auxin.transport.polar auxin transport.BIG... 0.15 OrthoFinder output from all 47 species
AMTR_s00090p00114080 DOC1, ASA1,... Phytohormones.auxin.transport.polar auxin transport.BIG... 0.09 OrthoFinder output from all 47 species
Adi_g017199 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.06 OrthoFinder output from all 47 species
Aev_g27442 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.02 OrthoFinder output from all 47 species
Ala_g11928 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.14 OrthoFinder output from all 47 species
Als_g10524 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.05 OrthoFinder output from all 47 species
Aob_g22705 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene46863.t1 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0061.g035098 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.08 OrthoFinder output from all 47 species
Ceric.14G095600.1 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000158.22 DOC1, ASA1,... Auxin transport protein BIG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dcu_g43763 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.19 OrthoFinder output from all 47 species
Ehy_g05117 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.03 OrthoFinder output from all 47 species
Ehy_g24980 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01036538001 DOC1, ASA1,... Phytohormones.auxin.transport.polar auxin transport.BIG... 0.16 OrthoFinder output from all 47 species
Gb_03145 DOC1, ASA1,... BIG auxin transport regulator protein 0.11 OrthoFinder output from all 47 species
LOC_Os09g07300.1 DOC1, ASA1,... BIG auxin transport regulator protein 0.1 OrthoFinder output from all 47 species
Lfl_g12340 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.11 OrthoFinder output from all 47 species
MA_10425891g0010 DOC1, ASA1,... BIG auxin transport regulator protein 0.18 OrthoFinder output from all 47 species
MA_10436857g0010 DOC1, ASA1,... Auxin transport protein BIG OS=Arabidopsis thaliana... 0.25 OrthoFinder output from all 47 species
MA_10437010g0030 DOC1, ASA1,... Auxin transport protein BIG OS=Oryza sativa subsp.... 0.12 OrthoFinder output from all 47 species
MA_141071g0010 DOC1, ASA1,... Auxin transport protein BIG OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
MA_18467g0010 DOC1, ASA1,... Auxin transport protein BIG OS=Oryza sativa subsp.... 0.13 OrthoFinder output from all 47 species
MA_92502g0010 ATROP4, ROP4,... Rac-like GTP-binding protein 7 OS=Oryza sativa subsp.... 0.09 OrthoFinder output from all 47 species
MA_9930317g0010 DOC1, ASA1,... Auxin transport protein BIG OS=Arabidopsis thaliana... 0.19 OrthoFinder output from all 47 species
Mp2g04600.1 DOC1, ASA1,... BIG auxin transport regulator protein 0.12 OrthoFinder output from all 47 species
Msp_g24012 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.11 OrthoFinder output from all 47 species
Nbi_g22773 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.02 OrthoFinder output from all 47 species
Ore_g38131 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.14 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005167 DOC1, ASA1,... regulatory protein *(BIG) of auxin transport & original... 0.08 OrthoFinder output from all 47 species
Sam_g27860 No alias regulatory protein *(BIG) of auxin transport & original... 0.04 OrthoFinder output from all 47 species
Smo141341 DOC1, ASA1,... Phytohormones.auxin.transport.polar auxin transport.BIG... 0.11 OrthoFinder output from all 47 species
Smo444506 DOC1, ASA1,... Phytohormones.auxin.transport.polar auxin transport.BIG... 0.03 OrthoFinder output from all 47 species
Solyc02g089260.4.1 DOC1, ASA1,... BIG auxin transport regulator protein 0.14 OrthoFinder output from all 47 species
Zm00001e033628_P002 DOC1, ASA1,... BIG auxin transport regulator protein 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005829 cytosol IDA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
BP GO:0009620 response to fungus IMP Interproscan
BP GO:0009640 photomorphogenesis IMP Interproscan
BP GO:0009733 response to auxin IMP Interproscan
BP GO:0009826 unidimensional cell growth IMP Interproscan
BP GO:0009926 auxin polar transport IDA Interproscan
BP GO:0010311 lateral root formation IMP Interproscan
CC GO:0016020 membrane IDA Interproscan
BP GO:0048281 inflorescence morphogenesis IMP Interproscan
BP GO:0048283 indeterminate inflorescence morphogenesis IMP Interproscan
BP GO:0048364 root development IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
CC GO:0000932 P-body IEP HCCA
BP GO:0002376 immune system process IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004402 histone acetyltransferase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005770 late endosome IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006473 protein acetylation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0006955 immune response IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007032 endosome organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009292 horizontal gene transfer IEP HCCA
BP GO:0009294 DNA-mediated transformation IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009660 amyloplast organization IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0009959 negative gravitropism IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0010199 organ boundary specification between lateral organs and the meristem IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0010267 ta-siRNA processing IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0010638 positive regulation of organelle organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016050 vesicle organization IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0016441 post-transcriptional gene silencing IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019216 regulation of lipid metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0021700 developmental maturation IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030422 siRNA processing IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
MF GO:0034212 peptide N-acetyltransferase activity IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0035194 RNA-mediated post-transcriptional gene silencing IEP HCCA
BP GO:0035195 miRNA-mediated gene silencing IEP HCCA
BP GO:0035196 miRNA processing IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0035278 miRNA-mediated gene silencing by inhibition of translation IEP HCCA
CC GO:0035770 ribonucleoprotein granule IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0043934 sporulation IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048469 cell maturation IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0048764 trichoblast maturation IEP HCCA
BP GO:0048765 root hair cell differentiation IEP HCCA
BP GO:0048859 formation of anatomical boundary IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050994 regulation of lipid catabolic process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0052386 cell wall thickening IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
BP GO:0052545 callose localization IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070918 regulatory ncRNA processing IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071695 anatomical structure maturation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0090213 regulation of radial pattern formation IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
BP GO:0090691 formation of plant organ boundary IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025704 E3_Ub_ligase_UBR4_C 4177 5074
IPR000433 Znf_ZZ 2615 2647
No external refs found!