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  5. AT3G01330

AT3G01330 (E2FF, DEL3, E2L2)


Aliases : E2FF, DEL3, E2L2

Description : DP-E2F-like protein 3


Gene families : OG0004589 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004589_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G01330

Target Alias Description ECC score Gene Family Method Actions
Als_g46504 DEL1, E2FE, E2L3 cell cycle interphase transcription factor *(DEL) &... 0.05 OrthoFinder output from all 47 species
Als_g49953 DEL1, E2FE, E2L3 E2F-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14228 DEL1, E2FE, E2L3 E2F-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene47792.t1 DEL1, E2FE,... E2F-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47792.t2 DEL1, E2FE,... E2F-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001154 DEL1, E2FE, E2L3 E2F-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.11G046800.1 DEL1, E2FE,... E2F-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.22G042300.1 DEL1, E2FE,... E2F-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g06912 DEL1, E2FE, E2L3 E2F-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01007832001 DEL1, E2FE, E2L3 RNA processing.organelle machineries.RNA... 0.05 OrthoFinder output from all 47 species
Gb_38482 DEL1, E2FE, E2L3 DEL cell cycle interphase transcription factor.... 0.06 OrthoFinder output from all 47 species
LOC_Os02g50630.1 DEL1, E2FE,... DEL cell cycle interphase transcription factor.... 0.07 OrthoFinder output from all 47 species
LOC_Os06g13670.1 DEL1, E2FE,... DEL cell cycle interphase transcription factor.... 0.05 OrthoFinder output from all 47 species
Len_g58085 DEL1, E2FE, E2L3 E2F-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g20990.1 DEL1, E2FE, E2L3 DEL cell cycle interphase transcription factor.... 0.09 OrthoFinder output from all 47 species
Msp_g15665 DEL1, E2FE, E2L3 E2F-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03052 DEL1, E2FE, E2L3 E2F-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015720 DEL1, E2FE, E2L3 E2F-type transcription factor & original description: CDS=1-1722 0.05 OrthoFinder output from all 47 species
Smo421405 DEL1, E2FE, E2L3 RNA biosynthesis.transcriptional activation.E2F/DP... 0.03 OrthoFinder output from all 47 species
Solyc02g087310.3.1 E2FF, DEL3,... DEL cell cycle interphase transcription factor.... 0.07 OrthoFinder output from all 47 species
Solyc03g113760.3.1 DEL1, E2FE,... DEL cell cycle interphase transcription factor.... 0.06 OrthoFinder output from all 47 species
Spa_g47096 DEL1, E2FE, E2L3 E2F-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44467 DEL1, E2FE, E2L3 E2F-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015774_P001 DEL1, E2FE,... DEL cell cycle interphase transcription factor.... 0.03 OrthoFinder output from all 47 species
Zm00001e023920_P001 DEL1, E2FE,... DEL cell cycle interphase transcription factor.... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IDA Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
BP GO:0006261 DNA-templated DNA replication RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000012 single strand break repair IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000278 mitotic cell cycle IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
BP GO:0000723 telomere maintenance IEP HCCA
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0001558 regulation of cell growth IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003713 transcription coactivator activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006266 DNA ligation IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006271 DNA strand elongation involved in DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006312 mitotic recombination IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007140 male meiotic nuclear division IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0009957 epidermal cell fate specification IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016444 somatic cell DNA recombination IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016572 obsolete histone phosphorylation IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022616 DNA strand elongation IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031507 heterochromatin formation IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0035966 response to topologically incorrect protein IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
BP GO:0042023 DNA endoreduplication IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0044786 cell cycle DNA replication IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051788 response to misfolded protein IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0140013 meiotic nuclear division IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:0140718 facultative heterochromatin formation IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR003316 E2F_WHTH_DNA-bd_dom 22 86
IPR003316 E2F_WHTH_DNA-bd_dom 146 225
No external refs found!