AT3G01280 (ATVDAC1, VDAC1)

Aliases : ATVDAC1, VDAC1

Description : voltage dependent anion channel 1

Gene families : OG0000555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000555_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G01280
Cluster	HCCA: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
Adi_g009188	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g014599	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g105002	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g00366	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g01156	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene61361.t1	ATVDAC1, VDAC1,...	voltage-gated anion channel *(VDAC) & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g07427	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000829.10	VDAC2, ATVDAC2	Solute transport.porins.VDAC voltage-gated anion channel	0.05	OrthoFinder output from all 47 species
Cre01.g013700	No alias	Solute transport.porins.VDAC voltage-gated anion channel	0.02	OrthoFinder output from all 47 species
GSVIVT01011346001	ATVDAC1, VDAC1	Solute transport.porins.VDAC voltage-gated anion channel	0.03	OrthoFinder output from all 47 species
Gb_41359	ATVDAC1, VDAC1	voltage-gated anion channel (VDAC)	0.03	OrthoFinder output from all 47 species
LOC_Os09g19734.1	ICS2, ATICS2,...	isochorismate synthase. isochorismate synthase....	0.03	OrthoFinder output from all 47 species
Len_g14440	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.05	OrthoFinder output from all 47 species
Len_g18818	ATVDAC3, VDAC3	voltage-gated anion channel *(VDAC) & original description: none	0.03	OrthoFinder output from all 47 species
MA_10427919g0010	VDAC2, ATVDAC2	voltage-gated anion channel (VDAC)	0.09	OrthoFinder output from all 47 species
MA_147596g0010	ATVDAC1, VDAC1	voltage-gated anion channel (VDAC)	0.03	OrthoFinder output from all 47 species
MA_182935g0010	ATVDAC3, VDAC3	voltage-gated anion channel (VDAC)	0.03	OrthoFinder output from all 47 species
MA_635089g0010	ATVDAC3, VDAC3	Mitochondrial outer membrane protein porin of 34 kDa...	0.1	OrthoFinder output from all 47 species
Msp_g01917	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g12221	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g15381	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.02	OrthoFinder output from all 47 species
Smo271012	ATVDAC1, VDAC1	Solute transport.porins.VDAC voltage-gated anion channel	0.04	OrthoFinder output from all 47 species
Spa_g05509	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g06381	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g01714	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g05412	ATVDAC3, VDAC3	voltage-gated anion channel *(VDAC) & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g29848	ATVDAC1, VDAC1	voltage-gated anion channel *(VDAC) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e009733_P001	ATVDAC1, VDAC1,...	voltage-gated anion channel (VDAC)	0.05	OrthoFinder output from all 47 species
Zm00001e033926_P001	ATVDAC1, VDAC1,...	voltage-gated anion channel (VDAC)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005244	voltage-gated monoatomic ion channel activity	None	Extended
MF	GO:0005253	monoatomic anion channel activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005739	mitochondrion	ISM	Interproscan
CC	GO:0005741	mitochondrial outer membrane	ISS	Interproscan
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	RCA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006820	monoatomic anion transport	ISS	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008308	voltage-gated monoatomic anion channel activity	IMP	Interproscan
MF	GO:0008308	voltage-gated monoatomic anion channel activity	ISS	Interproscan
MF	GO:0008509	monoatomic anion transmembrane transporter activity	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009536	plastid	IDA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009617	response to bacterium	IEP	Interproscan
BP	GO:0009853	photorespiration	RCA	Interproscan
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0019867	outer membrane	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031966	mitochondrial membrane	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031968	organelle outer membrane	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0035966	response to topologically incorrect protein	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043094	cellular metabolic compound salvage	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043248	proteasome assembly	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051788	response to misfolded protein	RCA	Interproscan
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080129	proteasome core complex assembly	RCA	Interproscan
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004588	orotate phosphoribosyltransferase activity	IEP	HCCA
MF	GO:0004590	orotidine-5'-phosphate decarboxylase activity	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	HCCA
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006479	protein methylation	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0008213	protein alkylation	IEP	HCCA
BP	GO:0009116	nucleoside metabolic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009218	pyrimidine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009220	pyrimidine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009267	cellular response to starvation	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
BP	GO:0009744	response to sucrose	IEP	HCCA
BP	GO:0009746	response to hexose	IEP	HCCA
BP	GO:0009749	response to glucose	IEP	HCCA
BP	GO:0009750	response to fructose	IEP	HCCA
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	HCCA
BP	GO:0010393	galacturonan metabolic process	IEP	HCCA
CC	GO:0015935	small ribosomal subunit	IEP	HCCA
BP	GO:0016036	cellular response to phosphate starvation	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016571	histone methylation	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0018022	peptidyl-lysine methylation	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
CC	GO:0022627	cytosolic small ribosomal subunit	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0031667	response to nutrient levels	IEP	HCCA
BP	GO:0031668	cellular response to extracellular stimulus	IEP	HCCA
BP	GO:0031669	cellular response to nutrient levels	IEP	HCCA
BP	GO:0034284	response to monosaccharide	IEP	HCCA
BP	GO:0034285	response to disaccharide	IEP	HCCA
BP	GO:0034406	cell wall beta-glucan metabolic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0034968	histone lysine methylation	IEP	HCCA
BP	GO:0042594	response to starvation	IEP	HCCA
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
CC	GO:0044391	ribosomal subunit	IEP	HCCA
BP	GO:0045488	pectin metabolic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051567	histone H3-K9 methylation	IEP	HCCA
BP	GO:0052541	plant-type cell wall cellulose metabolic process	IEP	HCCA
BP	GO:0052546	cell wall pectin metabolic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0061647	histone H3-K9 modification	IEP	HCCA
BP	GO:0071496	cellular response to external stimulus	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901657	glycosyl compound metabolic process	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR027246	Porin_Euk/Tom40	5	269

External Links

No external refs found!

AT3G01280 (ATVDAC1, VDAC1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation