AT2G47240 (CER8, LACS1)

Aliases : CER8, LACS1

Description : AMP-dependent synthetase and ligase family protein

Gene families : OG0000612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000612_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G47240

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00003p00117760	CER8, LACS1,...	Enzyme classification.EC_6 ligases.EC_6.2 ligase forming...	0.06	OrthoFinder output from all 47 species
AMTR_s00025p00243250	LACS6, ATLACS6,...	Lipid metabolism.lipid degradation.fatty acid...	0.02	OrthoFinder output from all 47 species
Adi_g008530	LACS6, ATLACS6	EC_6.2 ligase forming carbon-sulfur bond & original...	0.02	OrthoFinder output from all 47 species
Adi_g114074	LACS4	EC_6.2 ligase forming carbon-sulfur bond & original...	0.02	OrthoFinder output from all 47 species
Aev_g04110	LACS4	EC_6.2 ligase forming carbon-sulfur bond & original...	0.05	OrthoFinder output from all 47 species
Als_g03807	LACS4	EC_6.2 ligase forming carbon-sulfur bond & original...	0.02	OrthoFinder output from all 47 species
Aob_g07369	LACS6, ATLACS6	EC_6.2 ligase forming carbon-sulfur bond & original...	0.02	OrthoFinder output from all 47 species
Aop_g06527	LACS4	EC_6.2 ligase forming carbon-sulfur bond & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene16145.t1	ATLACS7, LACS7,...	EC_6.2 ligase forming carbon-sulfur bond & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0006.g010150	LACS4	EC_6.2 ligase forming carbon-sulfur bond & original...	0.02	OrthoFinder output from all 47 species
Ceric.24G023000.1	LACS4, Ceric.24G023000	EC_6.2 ligase forming carbon-sulfur bond & original...	0.03	OrthoFinder output from all 47 species
Dac_g13723	LACS4	EC_6.2 ligase forming carbon-sulfur bond & original...	0.02	OrthoFinder output from all 47 species
Dcu_g08877	LACS4	EC_6.2 ligase forming carbon-sulfur bond & original...	0.07	OrthoFinder output from all 47 species
Dde_g01611	LACS4	EC_6.2 ligase forming carbon-sulfur bond & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01028155001	CER8, LACS1	Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01031892001	LRD2, LACS2	Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_09959	LACS4	Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
Gb_18621	LACS4	Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Gb_32132	LACS4	Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
Gb_32723	LACS6, ATLACS6	Long chain acyl-CoA synthetase 6, peroxisomal...	0.03	OrthoFinder output from all 47 species
Gb_32724	ATLACS7, LACS7	Long chain acyl-CoA synthetase 7, peroxisomal...	0.05	OrthoFinder output from all 47 species
LOC_Os01g48910.2	LACS4, LOC_Os01g48910	Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
LOC_Os05g04170.1	CER8, LACS1,...	Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
LOC_Os11g35400.1	LRD2, LACS2,...	Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
Len_g16036	LACS4	EC_6.2 ligase forming carbon-sulfur bond & original...	0.02	OrthoFinder output from all 47 species
MA_10432761g0010	LACS4	Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana...	0.08	OrthoFinder output from all 47 species
MA_839621g0010	No alias	Long chain acyl-CoA synthetase 5 OS=Arabidopsis thaliana...	0.07	OrthoFinder output from all 47 species
Msp_g11320	LACS4	EC_6.2 ligase forming carbon-sulfur bond & original...	0.03	OrthoFinder output from all 47 species
Msp_g20518	ATLACS7, LACS7	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g03105	LACS4	EC_6.2 ligase forming carbon-sulfur bond & original...	0.03	OrthoFinder output from all 47 species
Pnu_g09293	LACS4	EC_6.2 ligase forming carbon-sulfur bond & original...	0.02	OrthoFinder output from all 47 species
Pnu_g15322	LACS4	EC_6.2 ligase forming carbon-sulfur bond & original...	0.02	OrthoFinder output from all 47 species
Pnu_g31368	LACS6, ATLACS6	EC_6.2 ligase forming carbon-sulfur bond & original...	0.02	OrthoFinder output from all 47 species
Pp3c6_11410V3.1	LACS4, Pp3c6_11410	AMP-dependent synthetase and ligase family protein	0.02	OrthoFinder output from all 47 species
Ppi_g17117	LACS4	EC_6.2 ligase forming carbon-sulfur bond & original...	0.04	OrthoFinder output from all 47 species
Sam_g15770	No alias	EC_6.2 ligase forming carbon-sulfur bond & original...	0.03	OrthoFinder output from all 47 species
Sam_g16833	No alias	EC_6.2 ligase forming carbon-sulfur bond & original...	0.02	OrthoFinder output from all 47 species
Solyc01g079240.3.1	CER8, LACS1,...	Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana...	0.08	OrthoFinder output from all 47 species
Solyc01g095750.2.1	LACS4, Solyc01g095750	Long chain acyl-CoA synthetase 4 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc01g099100.4.1	LACS6, ATLACS6,...	peroxisomal long-chain acyl-CoA synthetase	0.04	OrthoFinder output from all 47 species
Solyc01g109180.4.1	LRD2, LACS2,...	Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana...	0.09	OrthoFinder output from all 47 species
Solyc09g075770.3.1	LACS6, ATLACS6,...	peroxisomal long-chain acyl-CoA synthetase	0.07	OrthoFinder output from all 47 species
Spa_g26451	LACS4	EC_6.2 ligase forming carbon-sulfur bond & original...	0.06	OrthoFinder output from all 47 species
Spa_g47685	LACS4	EC_6.2 ligase forming carbon-sulfur bond & original...	0.03	OrthoFinder output from all 47 species
Tin_g01150	LACS4	EC_6.2 ligase forming carbon-sulfur bond & original...	0.03	OrthoFinder output from all 47 species
Zm00001e024608_P001	LRD2, LACS2,...	Long chain acyl-CoA synthetase 2 OS=Arabidopsis thaliana...	0.09	OrthoFinder output from all 47 species
Zm00001e040332_P001	CER8, LACS1,...	Long chain acyl-CoA synthetase 1 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001676	long-chain fatty acid metabolic process	ISS	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	IDA	Interproscan
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	TAS	Interproscan
BP	GO:0006633	fatty acid biosynthetic process	ISS	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009627	systemic acquired resistance	RCA	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010025	wax biosynthetic process	IMP	Interproscan
BP	GO:0010103	stomatal complex morphogenesis	RCA	Interproscan
BP	GO:0010143	cutin biosynthetic process	IMP	Interproscan
BP	GO:0010166	wax metabolic process	None	Extended
MF	GO:0015645	fatty acid ligase activity	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016405	CoA-ligase activity	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	None	Extended
MF	GO:0016878	acid-thiol ligase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0031957	very long-chain fatty acid-CoA ligase activity	IDA	Interproscan
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034976	response to endoplasmic reticulum stress	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0090626	plant epidermis morphogenesis	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:1901568	fatty acid derivative metabolic process	None	Extended
BP	GO:1901570	fatty acid derivative biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0000902	cell morphogenesis	IEP	HCCA
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	HCCA
BP	GO:0001708	cell fate specification	IEP	HCCA
BP	GO:0001932	regulation of protein phosphorylation	IEP	HCCA
BP	GO:0001933	negative regulation of protein phosphorylation	IEP	HCCA
BP	GO:0002213	defense response to insect	IEP	HCCA
BP	GO:0003002	regionalization	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	HCCA
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
MF	GO:0004565	beta-galactosidase activity	IEP	HCCA
MF	GO:0004860	protein kinase inhibitor activity	IEP	HCCA
MF	GO:0004861	cyclin-dependent protein serine/threonine kinase inhibitor activity	IEP	HCCA
BP	GO:0006469	negative regulation of protein kinase activity	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
MF	GO:0008374	O-acyltransferase activity	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009808	lignin metabolic process	IEP	HCCA
BP	GO:0009809	lignin biosynthetic process	IEP	HCCA
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0009908	flower development	IEP	HCCA
BP	GO:0009909	regulation of flower development	IEP	HCCA
BP	GO:0009911	positive regulation of flower development	IEP	HCCA
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0010091	trichome branching	IEP	HCCA
BP	GO:0010093	specification of floral organ identity	IEP	HCCA
BP	GO:0010311	lateral root formation	IEP	HCCA
BP	GO:0010325	raffinose family oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0010440	stomatal lineage progression	IEP	HCCA
BP	GO:0010563	negative regulation of phosphorus metabolic process	IEP	HCCA
MF	GO:0015925	galactosidase activity	IEP	HCCA
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	HCCA
MF	GO:0019207	kinase regulator activity	IEP	HCCA
MF	GO:0019210	kinase inhibitor activity	IEP	HCCA
MF	GO:0019887	protein kinase regulator activity	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
MF	GO:0030291	protein serine/threonine kinase inhibitor activity	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031400	negative regulation of protein modification process	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0033673	negative regulation of kinase activity	IEP	HCCA
BP	GO:0040034	regulation of development, heterochronic	IEP	HCCA
BP	GO:0042325	regulation of phosphorylation	IEP	HCCA
BP	GO:0042326	negative regulation of phosphorylation	IEP	HCCA
BP	GO:0042335	cuticle development	IEP	HCCA
BP	GO:0043086	negative regulation of catalytic activity	IEP	HCCA
BP	GO:0043446	cellular alkane metabolic process	IEP	HCCA
BP	GO:0043447	alkane biosynthetic process	IEP	HCCA
BP	GO:0043549	regulation of kinase activity	IEP	HCCA
MF	GO:0045551	cinnamyl-alcohol dehydrogenase activity	IEP	HCCA
BP	GO:0045736	negative regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0045786	negative regulation of cell cycle	IEP	HCCA
BP	GO:0045859	regulation of protein kinase activity	IEP	HCCA
BP	GO:0045936	negative regulation of phosphate metabolic process	IEP	HCCA
MF	GO:0047196	long-chain-alcohol O-fatty-acyltransferase activity	IEP	HCCA
BP	GO:0048367	shoot system development	IEP	HCCA
BP	GO:0048437	floral organ development	IEP	HCCA
BP	GO:0048440	carpel development	IEP	HCCA
BP	GO:0048441	petal development	IEP	HCCA
BP	GO:0048444	floral organ morphogenesis	IEP	HCCA
BP	GO:0048481	plant ovule development	IEP	HCCA
BP	GO:0048506	regulation of timing of meristematic phase transition	IEP	HCCA
BP	GO:0048507	meristem development	IEP	HCCA
BP	GO:0048509	regulation of meristem development	IEP	HCCA
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IEP	HCCA
BP	GO:0048580	regulation of post-embryonic development	IEP	HCCA
BP	GO:0048582	positive regulation of post-embryonic development	IEP	HCCA
BP	GO:0048608	reproductive structure development	IEP	HCCA
BP	GO:0048731	system development	IEP	HCCA
BP	GO:0048827	phyllome development	IEP	HCCA
BP	GO:0048831	regulation of shoot system development	IEP	HCCA
BP	GO:0048832	specification of plant organ number	IEP	HCCA
BP	GO:0048833	specification of floral organ number	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0050832	defense response to fungus	IEP	HCCA
BP	GO:0051239	regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051338	regulation of transferase activity	IEP	HCCA
BP	GO:0051348	negative regulation of transferase activity	IEP	HCCA
MF	GO:0052722	fatty acid in-chain hydroxylase activity	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA
MF	GO:0071771	aldehyde decarbonylase activity	IEP	HCCA
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0071901	negative regulation of protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0090567	reproductive shoot system development	IEP	HCCA
BP	GO:0090701	specification of plant organ identity	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	HCCA
BP	GO:1904030	negative regulation of cyclin-dependent protein kinase activity	IEP	HCCA
BP	GO:2000026	regulation of multicellular organismal development	IEP	HCCA
BP	GO:2000038	regulation of stomatal complex development	IEP	HCCA
BP	GO:2000122	negative regulation of stomatal complex development	IEP	HCCA
BP	GO:2000241	regulation of reproductive process	IEP	HCCA
BP	GO:2000243	positive regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000873	AMP-dep_Synth/Lig_com	50	522

External Links

No external refs found!

AT2G47240 (CER8, LACS1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation