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  5. AT2G45980

AT2G45980


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G00355.2); Has 93 Blast hits to 90 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0000907 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000907_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G45980
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Adi_g089004 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g117744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03255 No alias cargo receptor protein *(ATI1/2) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08329 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s2254.g110000 No alias not classified & original description: CDS=104-955 0.03 OrthoFinder output from all 47 species
Ceric.01G002300.1 Ceric.01G002300 not classified & original description: pacid=50591300... 0.03 OrthoFinder output from all 47 species
Dcu_g06229 No alias cargo receptor protein *(ATI1/2) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036285001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g57600.2 LOC_Os02g57600 ATI1/2 autophagosome autophagic adapter protein 0.03 OrthoFinder output from all 47 species
Len_g16918 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426578g0010 No alias ATI1/2 autophagosome autophagic adapter protein 0.02 OrthoFinder output from all 47 species
Msp_g12772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g38517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g094770.4.1 Solyc01g094770 ATI1/2 autophagosome autophagic adapter protein 0.03 OrthoFinder output from all 47 species
Spa_g05444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54789 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023571_P002 Zm00001e023571 ATI1/2 autophagosome autophagic adapter protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis RCA Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
BP GO:0006623 protein targeting to vacuole RCA Interproscan
BP GO:0006914 autophagy RCA Interproscan
BP GO:0016049 cell growth RCA Interproscan
BP GO:0016192 vesicle-mediated transport RCA Interproscan
CC GO:0043231 intracellular membrane-bounded organelle IDA Interproscan
BP GO:0048193 Golgi vesicle transport RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000303 response to superoxide IEP HCCA
BP GO:0000305 response to oxygen radical IEP HCCA
MF GO:0002020 protease binding IEP HCCA
BP GO:0003002 regionalization IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003878 ATP citrate synthase activity IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005773 vacuole IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006085 acetyl-CoA biosynthetic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
CC GO:0009346 ATP-independent citrate lyase complex IEP HCCA
BP GO:0009838 abscission IEP HCCA
BP GO:0009954 proximal/distal pattern formation IEP HCCA
BP GO:0010227 floral organ abscission IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
BP GO:0015976 carbon utilization IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
CC GO:0031463 Cul3-RING ubiquitin ligase complex IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
BP GO:0035384 thioester biosynthetic process IEP HCCA
MF GO:0035671 enone reductase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046459 short-chain fatty acid metabolic process IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0071616 acyl-CoA biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
BP GO:0090342 obsolete regulation of cell aging IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!