AT2G42200 (AtSPL9, SPL9)

Aliases : AtSPL9, SPL9

Description : squamosa promoter binding protein-like 9

Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G42200

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00150040	SPL13, SPL13A,...	RNA biosynthesis.transcriptional activation.SBP...	0.03	OrthoFinder output from all 47 species
AMTR_s00019p00235390	SPL8,...	RNA biosynthesis.transcriptional activation.SBP...	0.07	OrthoFinder output from all 47 species
AMTR_s00022p00198330	AtSPL9, SPL9,...	RNA biosynthesis.transcriptional activation.SBP...	0.07	OrthoFinder output from all 47 species
AMTR_s00047p00197010	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SBP...	0.04	OrthoFinder output from all 47 species
AMTR_s00106p00142470	SPL11,...	RNA biosynthesis.transcriptional activation.SBP...	0.04	OrthoFinder output from all 47 species
AMTR_s00106p00142740	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AMTR_s00106p00144050	SPL8,...	RNA biosynthesis.transcriptional activation.SBP...	0.05	OrthoFinder output from all 47 species
Adi_g058412	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g077071	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g08078	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g17452	SPL8	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g38965	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g38966	SPL2	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g22799	SPL13, SPL13A	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g27957	AtSPL9, SPL9	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g04360	SPL3	SBP-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Als_g06099	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g06796	SPL3	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g08975	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g11381	SPL2	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g20948	SPL2	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g31920	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Als_g47037	SPL2	SBP-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Als_g47133	SPL2	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g31886	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene23632.t1	SPL8, Aspi01Gene23632	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene26421.t1	SPL8, Aspi01Gene26421	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene30474.t1	SPL8, Aspi01Gene30474	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene33252.t1	SPL8, Aspi01Gene33252	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene67362.t1	Aspi01Gene67362	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0211.g058143	SPL3	SBP-type transcription factor & original description: CDS=17-1702	0.03	OrthoFinder output from all 47 species
Azfi_s0213.g058306	SPL2	SBP-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Azfi_s1820.g107212	No alias	not classified & original description: CDS=1-336	0.04	OrthoFinder output from all 47 species
Cba_g06624	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g26518	SPL2	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g34343	AtSPL9, SPL9	SBP-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g75896	SPL2	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.07G099600.1	SPL13, SPL13A,...	SBP-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.11G073300.1	SPL8, Ceric.11G073300	SBP-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.12G034000.1	SPL13, SPL13A,...	SBP-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.25G025600.1	SPL3, Ceric.25G025600	SBP-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.39G052200.1	SPL8, Ceric.39G052200	SBP-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dcu_g03001	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g12555	SPL8	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g14928	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g48961	SPL8	SBP-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g04651	SPL3	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g05026	SPL8	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g08410	SPL10	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g19323	SPL3	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g25686	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01010496001	SPL2	RNA biosynthesis.transcriptional activation.SBP...	0.04	OrthoFinder output from all 47 species
GSVIVT01018204001	No alias	RNA biosynthesis.transcriptional activation.SBP...	0.07	OrthoFinder output from all 47 species
GSVIVT01018205001	SPL2	RNA biosynthesis.transcriptional activation.SBP...	0.03	OrthoFinder output from all 47 species
Gb_03921	SPL8	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Gb_15605	SPL8	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Gb_26600	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Gb_27198	SPL2	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Gb_38013	SPL2	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Gb_38014	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os01g69830.1	SPL13, SPL13A,...	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
LOC_Os02g04680.1	SPL2, LOC_Os02g04680	transcription factor (SBP)	0.05	OrthoFinder output from all 47 species
LOC_Os02g08070.1	SPL8, LOC_Os02g08070	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
LOC_Os06g49010.4	SPL2, LOC_Os06g49010	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
LOC_Os07g32170.1	SPL4, LOC_Os07g32170	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
LOC_Os08g39890.1	AtSPL9, SPL9,...	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
LOC_Os09g31438.1	AtSPL9, SPL9,...	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Len_g17980	SPL12	SBP-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Len_g41015	SPL3	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Len_g48733	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_10435426g0010	AtSPL9, SPL9	transcription factor (SBP)	0.05	OrthoFinder output from all 47 species
MA_3179g0020	SPL8	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
MA_92489g0010	SPL2	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Mp1g10020.1	SPL8	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
Mp1g10030.1	SPL2	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
Msp_g03985	SPL2	SBP-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Msp_g08289	SPL3	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g13816	SPL2	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g15344	SPL7, ATSPL7	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g16004	SPL2	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g32603	No alias	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g07869	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g15680	SPL8	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g48701	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g20544	SPL8	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g22224	SPL2	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006256	SPL2	SBP-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010846	SPL8	SBP-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020524	SPL2	SBP-type transcription factor & original description: CDS=1-1641	0.03	OrthoFinder output from all 47 species
Sam_g14898	No alias	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g30123	No alias	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g48834	No alias	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g090730.3.1	SPL8, Solyc01g090730	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Solyc02g077920.4.1	SPL3, Solyc02g077920	transcription factor (SBP)	0.05	OrthoFinder output from all 47 species
Solyc07g062980.4.1	SPL3, Solyc07g062980	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Solyc10g018780.3.1	SPL8, Solyc10g018780	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
Solyc10g078700.3.1	AtSPL9, SPL9,...	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Tin_g08757	SPL4	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g32347	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e006686_P001	SPL8, Zm00001e006686	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Zm00001e010443_P001	SPL5, Zm00001e010443	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Zm00001e018817_P003	SPL13, SPL13A,...	transcription factor (SBP)	0.06	OrthoFinder output from all 47 species
Zm00001e041526_P001	SPL3, Zm00001e041526	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IGI	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048366	leaf development	IDA	Interproscan
BP	GO:0048366	leaf development	IMP	Interproscan
BP	GO:0048653	anther development	IGI	Interproscan
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905428	regulation of plant organ formation	None	Extended
BP	GO:2000025	regulation of leaf formation	IMP	Interproscan
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	IEP	HCCA
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0008361	regulation of cell size	IEP	HCCA
MF	GO:0008374	O-acyltransferase activity	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009741	response to brassinosteroid	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009806	lignan metabolic process	IEP	HCCA
BP	GO:0009807	lignan biosynthetic process	IEP	HCCA
BP	GO:0009826	unidimensional cell growth	IEP	HCCA
BP	GO:0009827	plant-type cell wall modification	IEP	HCCA
BP	GO:0009860	pollen tube growth	IEP	HCCA
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0009908	flower development	IEP	HCCA
BP	GO:0009909	regulation of flower development	IEP	HCCA
BP	GO:0009911	positive regulation of flower development	IEP	HCCA
BP	GO:0009932	cell tip growth	IEP	HCCA
BP	GO:0010016	shoot system morphogenesis	IEP	HCCA
BP	GO:0010025	wax biosynthetic process	IEP	HCCA
BP	GO:0010033	response to organic substance	IEP	HCCA
BP	GO:0010154	fruit development	IEP	HCCA
BP	GO:0010166	wax metabolic process	IEP	HCCA
BP	GO:0010226	response to lithium ion	IEP	HCCA
BP	GO:0010229	inflorescence development	IEP	HCCA
BP	GO:0010321	regulation of vegetative phase change	IEP	HCCA
BP	GO:0010358	leaf shaping	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0032535	regulation of cellular component size	IEP	HCCA
BP	GO:0040034	regulation of development, heterochronic	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0045595	regulation of cell differentiation	IEP	HCCA
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	HCCA
MF	GO:0046910	pectinesterase inhibitor activity	IEP	HCCA
MF	GO:0047196	long-chain-alcohol O-fatty-acyltransferase activity	IEP	HCCA
BP	GO:0048367	shoot system development	IEP	HCCA
BP	GO:0048439	flower morphogenesis	IEP	HCCA
BP	GO:0048481	plant ovule development	IEP	HCCA
BP	GO:0048506	regulation of timing of meristematic phase transition	IEP	HCCA
BP	GO:0048507	meristem development	IEP	HCCA
BP	GO:0048509	regulation of meristem development	IEP	HCCA
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048580	regulation of post-embryonic development	IEP	HCCA
BP	GO:0048582	positive regulation of post-embryonic development	IEP	HCCA
BP	GO:0048588	developmental cell growth	IEP	HCCA
BP	GO:0048589	developmental growth	IEP	HCCA
BP	GO:0048608	reproductive structure development	IEP	HCCA
BP	GO:0048731	system development	IEP	HCCA
BP	GO:0048831	regulation of shoot system development	IEP	HCCA
BP	GO:0051094	positive regulation of developmental process	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051239	regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051240	positive regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
BP	GO:0090066	regulation of anatomical structure size	IEP	HCCA
BP	GO:0090567	reproductive shoot system development	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1901568	fatty acid derivative metabolic process	IEP	HCCA
BP	GO:1901570	fatty acid derivative biosynthetic process	IEP	HCCA
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2000024	regulation of leaf development	IEP	HCCA
BP	GO:2000026	regulation of multicellular organismal development	IEP	HCCA
BP	GO:2000039	regulation of trichome morphogenesis	IEP	HCCA
BP	GO:2000241	regulation of reproductive process	IEP	HCCA
BP	GO:2000243	positive regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	74	147

External Links

No external refs found!

AT2G42200 (AtSPL9, SPL9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation