AT2G41710

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G41710

Target	Alias	Description	ECC score	Gene Family Method
Aev_g09099	RAP2.7, TOE1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01016352001	RAP2.7, TOE1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	OrthoFinder output from all 47 species
Gb_09764	WRI1, ATWRI1, ASML1, WRI	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
MA_67041g0010	No alias	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Ore_g04250	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g35092	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005634	nucleus	IC	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001558	regulation of cell growth	IEP	HCCA
MF	GO:0004462	lactoylglutathione lyase activity	IEP	HCCA
MF	GO:0004609	phosphatidylserine decarboxylase activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006094	gluconeogenesis	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0007346	regulation of mitotic cell cycle	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0008283	cell population proliferation	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009734	auxin-activated signaling pathway	IEP	HCCA
BP	GO:0009735	response to cytokinin	IEP	HCCA
BP	GO:0009819	drought recovery	IEP	HCCA
BP	GO:0009860	pollen tube growth	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010038	response to metal ion	IEP	HCCA
BP	GO:0010119	regulation of stomatal movement	IEP	HCCA
BP	GO:0010252	auxin homeostasis	IEP	HCCA
BP	GO:0010638	positive regulation of organelle organization	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0016846	carbon-sulfur lyase activity	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019319	hexose biosynthetic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0031110	regulation of microtubule polymerization or depolymerization	IEP	HCCA
BP	GO:0031112	positive regulation of microtubule polymerization or depolymerization	IEP	HCCA
BP	GO:0031114	regulation of microtubule depolymerization	IEP	HCCA
BP	GO:0031117	positive regulation of microtubule depolymerization	IEP	HCCA
BP	GO:0032886	regulation of microtubule-based process	IEP	HCCA
BP	GO:0033043	regulation of organelle organization	IEP	HCCA
BP	GO:0040014	regulation of multicellular organism growth	IEP	HCCA
CC	GO:0042995	cell projection	IEP	HCCA
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046364	monosaccharide biosynthetic process	IEP	HCCA
BP	GO:0046686	response to cadmium ion	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048528	post-embryonic root development	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
BP	GO:0048768	root hair cell tip growth	IEP	HCCA
BP	GO:0048878	chemical homeostasis	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0051493	regulation of cytoskeleton organization	IEP	HCCA
BP	GO:0051495	positive regulation of cytoskeleton organization	IEP	HCCA
BP	GO:0070507	regulation of microtubule cytoskeleton organization	IEP	HCCA
BP	GO:0090333	regulation of stomatal closure	IEP	HCCA
CC	GO:0090406	pollen tube	IEP	HCCA
BP	GO:0090696	post-embryonic plant organ development	IEP	HCCA
CC	GO:0120025	plasma membrane bounded cell projection	IEP	HCCA
BP	GO:1901879	regulation of protein depolymerization	IEP	HCCA
BP	GO:1901881	positive regulation of protein depolymerization	IEP	HCCA
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	HCCA
BP	GO:1902905	positive regulation of supramolecular fiber organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	70	128

External Links

No external refs found!

AT2G41710

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation