AT2G34680 (AIR9)

Aliases : AIR9

Description : Outer arm dynein light chain 1 protein

Gene families : OG0002610 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002610_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G34680

Target	Alias	Description	ECC score	Gene Family Method
Aev_g17891	AIR9	cell plate maturation factor *(AIR9) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g18228	AIR9	cell plate maturation factor *(AIR9) & original description: none	0.06	OrthoFinder output from all 47 species
Ala_g05812	AIR9	cell plate maturation factor *(AIR9) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g03904	AIR9	cell plate maturation factor *(AIR9) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g16343	AIR9	cell plate maturation factor *(AIR9) & original description: none	0.02	OrthoFinder output from all 47 species
Als_g36663	AIR9	cell plate maturation factor *(AIR9) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g10887	AIR9	cell plate maturation factor *(AIR9) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g06230	AIR9	cell plate maturation factor *(AIR9) & original description: none	0.03	OrthoFinder output from all 47 species
Gb_01915	AIR9	cell plate maturation factor (AIR9)	0.07	OrthoFinder output from all 47 species
Len_g21142	AIR9	cell plate maturation factor *(AIR9) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g35852	AIR9	cell plate maturation factor *(AIR9) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g58611	AIR9	cell plate maturation factor *(AIR9) & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g32213	AIR9	cell plate maturation factor *(AIR9) & original description: none	0.02	OrthoFinder output from all 47 species
MA_10437099g0010	AIR9	cell plate maturation factor (AIR9)	0.02	OrthoFinder output from all 47 species
Mp2g11020.1	AIR9	cell plate maturation factor (AIR9)	0.03	OrthoFinder output from all 47 species
Msp_g14652	AIR9	cell plate maturation factor *(AIR9) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g05011	AIR9	cell plate maturation factor *(AIR9) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g24913	AIR9	cell plate maturation factor *(AIR9) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g13837	AIR9	cell plate maturation factor *(AIR9) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g55796	AIR9	cell plate maturation factor *(AIR9) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0007015	actin filament organization	None	Extended
BP	GO:0007155	cell adhesion	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010014	meristem initiation	RCA	Interproscan
BP	GO:0010015	root morphogenesis	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010090	trichome morphogenesis	RCA	Interproscan
BP	GO:0010101	post-embryonic root morphogenesis	None	Extended
BP	GO:0010102	lateral root morphogenesis	IEP	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	RCA	Interproscan
BP	GO:0021700	developmental maturation	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045010	actin nucleation	RCA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0045595	regulation of cell differentiation	RCA	Interproscan
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048589	developmental growth	RCA	Interproscan
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	RCA	Interproscan
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0090697	post-embryonic plant organ morphogenesis	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004559	alpha-mannosidase activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005217	intracellular ligand-gated monoatomic ion channel activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0006873	cellular monoatomic ion homeostasis	IEP	HCCA
BP	GO:0006874	cellular calcium ion homeostasis	IEP	HCCA
BP	GO:0006875	cellular metal ion homeostasis	IEP	HCCA
BP	GO:0010048	vernalization response	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0015923	mannosidase activity	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
BP	GO:0030003	cellular monoatomic cation homeostasis	IEP	HCCA
BP	GO:0050801	monoatomic ion homeostasis	IEP	HCCA
BP	GO:0055065	metal ion homeostasis	IEP	HCCA
BP	GO:0055074	calcium ion homeostasis	IEP	HCCA
BP	GO:0055080	monoatomic cation homeostasis	IEP	HCCA
BP	GO:0055082	cellular chemical homeostasis	IEP	HCCA
BP	GO:0098771	inorganic ion homeostasis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025875	Leu-rich_rpt_4	339	375

External Links

No external refs found!

AT2G34680 (AIR9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation