AT2G33835 (FES1)

Aliases : FES1

Description : Zinc finger C-x8-C-x5-C-x3-H type family protein

Gene families : OG0000859 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000859_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G33835
Cluster	HCCA: Cluster_124

Target	Alias	Description	ECC score	Gene Family Method
Adi_g113323	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Als_g27332	No alias	component *(FES1) of FRI-C transcription effector...	0.02	OrthoFinder output from all 47 species
Cba_g23169	No alias	component *(FES1) of FRI-C transcription effector...	0.02	OrthoFinder output from all 47 species
Dde_g10766	No alias	component *(FES1) of FRI-C transcription effector...	0.02	OrthoFinder output from all 47 species
Len_g08104	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Msp_g15688	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species
Ore_g44437	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g41479	No alias	component *(FES1) of FRI-C transcription effector...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0010219	regulation of vernalization response	None	Extended
BP	GO:0010220	positive regulation of vernalization response	IGI	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006089	lactate metabolic process	IEP	HCCA
BP	GO:0006109	regulation of carbohydrate metabolic process	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006623	protein targeting to vacuole	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008170	N-methyltransferase activity	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0008175	tRNA methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0009438	methylglyoxal metabolic process	IEP	HCCA
CC	GO:0009705	plant-type vacuole membrane	IEP	HCCA
BP	GO:0010675	regulation of cellular carbohydrate metabolic process	IEP	HCCA
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
BP	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
BP	GO:0042180	cellular ketone metabolic process	IEP	HCCA
BP	GO:0042182	ketone catabolic process	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043255	regulation of carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0046185	aldehyde catabolic process	IEP	HCCA
BP	GO:0048571	long-day photoperiodism	IEP	HCCA
BP	GO:0051596	methylglyoxal catabolic process	IEP	HCCA
BP	GO:0061727	methylglyoxal catabolic process to lactate	IEP	HCCA
BP	GO:0062012	regulation of small molecule metabolic process	IEP	HCCA
BP	GO:0072665	protein localization to vacuole	IEP	HCCA
BP	GO:0072666	establishment of protein localization to vacuole	IEP	HCCA
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	HCCA
BP	GO:0080091	regulation of raffinose metabolic process	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
BP	GO:1900088	regulation of inositol biosynthetic process	IEP	HCCA
BP	GO:1900091	regulation of raffinose biosynthetic process	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1902930	regulation of alcohol biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000571	Znf_CCCH	101	121

External Links

No external refs found!

AT2G33835 (FES1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation