AT2G13680 (GLS2, ATGSL02, CALS5)

Aliases : GLS2, ATGSL02, CALS5

Description : callose synthase 5

Gene families : OG0000112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G13680
Cluster	HCCA: Cluster_33

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00037p00187160	evm_27.TU.AmTr_v1...	Callose synthase 9 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00150p00030620	GLS2, ATGSL02,...	Cell wall.callose.callose synthase	0.04	OrthoFinder output from all 47 species
Ala_g34220	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Als_g46169	ATGSL10, gsl10, CALS9	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g31920	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g05730	ATGSL01, GSL01,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g23483	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene47172.t1	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0020.g015340	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: CDS=243-5864	0.03	OrthoFinder output from all 47 species
Azfi_s0042.g026912	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: CDS=1-5835	0.04	OrthoFinder output from all 47 species
Azfi_s0140.g051248	GSL5, PMR4,...	EC_2.4 glycosyltransferase & original description: CDS=1-5910	0.03	OrthoFinder output from all 47 species
Azfi_s0159.g053976	ATGSL08, ATGSL8,...	EC_2.4 glycosyltransferase & original description: CDS=621-5987	0.04	OrthoFinder output from all 47 species
Ceric.12G070800.1	ATGSL01, GSL01,...	EC_2.4 glycosyltransferase & original description:...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000431.18	ATGSL09, atgsl9, gsl09	Cell wall.callose.callose synthase	0.02	OrthoFinder output from all 47 species
Dcu_g40022	ATGSL08, ATGSL8,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01000622001	GSL04, atgsl4,...	Cell wall.callose.callose synthase	0.04	OrthoFinder output from all 47 species
LOC_Os02g14900.1	GSL04, atgsl4,...	callose synthase	0.05	OrthoFinder output from all 47 species
LOC_Os02g58560.1	gsl12, ATGSL12,...	callose synthase	0.02	OrthoFinder output from all 47 species
LOC_Os03g03610.3	gsl12, ATGSL12,...	callose synthase	0.05	OrthoFinder output from all 47 species
LOC_Os06g08380.1	GLS2, ATGSL02,...	callose synthase	0.05	OrthoFinder output from all 47 species
Lfl_g12923	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
MA_10428413g0020	GLS2, ATGSL02, CALS5	Callose synthase 5 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_10428413g0040	GLS2, ATGSL02, CALS5	callose synthase	0.03	OrthoFinder output from all 47 species
Mp3g24830.1	GLS2, ATGSL02, CALS5	callose synthase	0.02	OrthoFinder output from all 47 species
Nbi_g03219	ATGSL01, GSL01,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g13092	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g15152	gsl12, ATGSL12	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g15483	ATGSL01, GSL01,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g59350	ATGSL08, ATGSL8,...	EC_2.4 glycosyltransferase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g60182	ATGSL10, gsl10, CALS9	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Smo449402	GLS2, ATGSL02, CALS5	Cell wall.callose.callose synthase	0.03	OrthoFinder output from all 47 species
Solyc07g061920.4.1	GSL04, atgsl4,...	callose synthase	0.04	OrthoFinder output from all 47 species
Solyc11g005980.3.1	GLS2, ATGSL02,...	callose synthase	0.05	OrthoFinder output from all 47 species
Spa_g39785	ATGSL08, ATGSL8,...	EC_2.4 glycosyltransferase & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e002613_P001	ATGSL08, ATGSL8,...	callose synthase	0.02	OrthoFinder output from all 47 species
Zm00001e016293_P001	gsl12, ATGSL12,...	callose synthase	0.03	OrthoFinder output from all 47 species
Zm00001e016298_P001	GSL06, ATGSL06,...	callose synthase	0.03	OrthoFinder output from all 47 species
Zm00001e029766_P001	GLS2, ATGSL02,...	callose synthase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000148	1,3-beta-D-glucan synthase complex	ISS	Interproscan
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0001558	regulation of cell growth	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003843	1,3-beta-D-glucan synthase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	None	Extended
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	IMP	Interproscan
BP	GO:0006075	(1->3)-beta-D-glucan biosynthetic process	ISS	Interproscan
BP	GO:0007049	cell cycle	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009556	microsporogenesis	IDA	Interproscan
BP	GO:0009556	microsporogenesis	IMP	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009827	plant-type cell wall modification	RCA	Interproscan
BP	GO:0009846	pollen germination	IMP	Interproscan
BP	GO:0009860	pollen tube growth	IDA	Interproscan
BP	GO:0009860	pollen tube growth	IMP	Interproscan
BP	GO:0009860	pollen tube growth	RCA	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010208	pollen wall assembly	IMP	Interproscan
BP	GO:0010584	pollen exine formation	RCA	Interproscan
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	None	Extended
BP	GO:0010927	cellular component assembly involved in morphogenesis	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0022604	regulation of cell morphogenesis	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034293	sexual sporulation	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043934	sporulation	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0048236	plant-type sporogenesis	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0051321	meiotic cell cycle	None	Extended
BP	GO:0051510	regulation of unidimensional cell growth	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080092	regulation of pollen tube growth	IMP	Interproscan
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
BP	GO:1903046	meiotic cell cycle process	None	Extended
CC	GO:1990234	transferase complex	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
BP	GO:0006897	endocytosis	IEP	HCCA
BP	GO:0007164	establishment of tissue polarity	IEP	HCCA
BP	GO:0010118	stomatal movement	IEP	HCCA
BP	GO:0010191	mucilage metabolic process	IEP	HCCA
BP	GO:0010192	mucilage biosynthetic process	IEP	HCCA
BP	GO:0010214	seed coat development	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	HCCA
MF	GO:0016308	1-phosphatidylinositol-4-phosphate 5-kinase activity	IEP	HCCA
CC	GO:0016324	apical plasma membrane	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
CC	GO:0042995	cell projection	IEP	HCCA
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	HCCA
BP	GO:0048354	mucilage biosynthetic process involved in seed coat development	IEP	HCCA
BP	GO:0048359	mucilage metabolic process involved in seed coat development	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
CC	GO:0090406	pollen tube	IEP	HCCA
CC	GO:0098590	plasma membrane region	IEP	HCCA
CC	GO:0120025	plasma membrane bounded cell projection	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR039431	Vta1/CALS_N	44	175
IPR026899	FKS1-like_dom1	325	436
IPR003440	Glyco_trans_48	1040	1732

External Links

No external refs found!

AT2G13680 (GLS2, ATGSL02, CALS5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation