AT1G79860 (ROPGEF12, MEE64, ATROPGEF12)

Aliases : ROPGEF12, MEE64, ATROPGEF12

Description : RHO guanyl-nucleotide exchange factor 12

Gene families : OG0000396 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000396_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G79860
Cluster	HCCA: Cluster_39

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00109p00064220	ROPGEF8,...	Multi-process regulation.Rop GTPase regulatory...	0.08	OrthoFinder output from all 47 species
AT1G52240	ATROPGEF11,...	RHO guanyl-nucleotide exchange factor 11	0.07	OrthoFinder output from all 47 species
AT2G45890	ATROPGEF4, RHS11, ROPGEF4	RHO guanyl-nucleotide exchange factor 4	0.07	OrthoFinder output from all 47 species
AT3G16130	PIRF2, ROPGEF13,...	RHO guanyl-nucleotide exchange factor 13	0.08	OrthoFinder output from all 47 species
AT3G24620	ROPGEF8, ATROPGEF8	RHO guanyl-nucleotide exchange factor 8	0.07	OrthoFinder output from all 47 species
Als_g22503	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Azfi_s0050.g030989	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.04	OrthoFinder output from all 47 species
Ceric.1Z028300.1	ROPGEF7,...	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
GSVIVT01015369001	ROPGEF8, ATROPGEF8	Multi-process regulation.Rop GTPase regulatory...	0.14	OrthoFinder output from all 47 species
GSVIVT01017070001	ROPGEF12, MEE64,...	Multi-process regulation.Rop GTPase regulatory...	0.11	OrthoFinder output from all 47 species
LOC_Os01g48410.1	ATROPGEF9,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.13	OrthoFinder output from all 47 species
LOC_Os01g55520.1	ATROPGEF11,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.12	OrthoFinder output from all 47 species
LOC_Os02g17240.1	ROPGEF8,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.09	OrthoFinder output from all 47 species
LOC_Os05g48640.1	ROPGEF8,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.06	OrthoFinder output from all 47 species
Nbi_g08604	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.02	OrthoFinder output from all 47 species
Nbi_g27149	ROPGEF7, ATROPGEF7	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Pir_g14467	ROPGEF7, ATROPGEF7	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Pir_g56461	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.03	OrthoFinder output from all 47 species
Ppi_g36002	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019675	ROPGEF7, ATROPGEF7	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0218.g026117	ATROPGEF1, ROPGEF1	RopGEF guanine nucleotide exchange factor *(PRONE) &...	0.02	OrthoFinder output from all 47 species
Solyc03g120650.4.1	ROPGEF12, MEE64,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.1	OrthoFinder output from all 47 species
Solyc12g044270.2.1	ROPGEF12, MEE64,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.04	OrthoFinder output from all 47 species
Zm00001e014205_P002	ROPGEF8,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.06	OrthoFinder output from all 47 species
Zm00001e015569_P002	ROPGEF14,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.04	OrthoFinder output from all 47 species
Zm00001e019750_P001	ROPGEF8,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.07	OrthoFinder output from all 47 species
Zm00001e020182_P002	ATROPGEF9,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.05	OrthoFinder output from all 47 species
Zm00001e024760_P001	ROPGEF8,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.06	OrthoFinder output from all 47 species
Zm00001e026517_P004	ROPGEF8,...	PRONE-type RopGEF guanine nucleotide exchange factor	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0001558	regulation of cell growth	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	IMP	Interproscan
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009860	pollen tube growth	IEP	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0022604	regulation of cell morphogenesis	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
CC	GO:0042995	cell projection	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051510	regulation of unidimensional cell growth	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080092	regulation of pollen tube growth	IGI	Interproscan
CC	GO:0090406	pollen tube	IDA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0120025	plasma membrane bounded cell projection	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002238	response to molecule of fungal origin	IEP	HCCA
MF	GO:0004439	phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	IEP	HCCA
MF	GO:0005199	structural constituent of cell wall	IEP	HCCA
MF	GO:0005388	P-type calcium transporter activity	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006882	cellular zinc ion homeostasis	IEP	HCCA
BP	GO:0007338	single fertilization	IEP	HCCA
BP	GO:0009566	fertilization	IEP	HCCA
BP	GO:0009846	pollen germination	IEP	HCCA
BP	GO:0010093	specification of floral organ identity	IEP	HCCA
BP	GO:0010208	pollen wall assembly	IEP	HCCA
BP	GO:0010584	pollen exine formation	IEP	HCCA
BP	GO:0010927	cellular component assembly involved in morphogenesis	IEP	HCCA
MF	GO:0015085	calcium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015662	P-type ion transporter activity	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016759	cellulose synthase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0030029	actin filament-based process	IEP	HCCA
BP	GO:0030048	actin filament-based movement	IEP	HCCA
MF	GO:0034485	phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	IEP	HCCA
MF	GO:0034593	phosphatidylinositol bisphosphate phosphatase activity	IEP	HCCA
MF	GO:0034594	phosphatidylinositol trisphosphate phosphatase activity	IEP	HCCA
MF	GO:0034595	phosphatidylinositol phosphate 5-phosphatase activity	IEP	HCCA
MF	GO:0046030	inositol trisphosphate phosphatase activity	IEP	HCCA
BP	GO:0046164	alcohol catabolic process	IEP	HCCA
BP	GO:0046174	polyol catabolic process	IEP	HCCA
BP	GO:0046434	organophosphate catabolic process	IEP	HCCA
BP	GO:0046838	phosphorylated carbohydrate dephosphorylation	IEP	HCCA
BP	GO:0046855	inositol phosphate dephosphorylation	IEP	HCCA
MF	GO:0046910	pectinesterase inhibitor activity	IEP	HCCA
BP	GO:0046916	cellular transition metal ion homeostasis	IEP	HCCA
BP	GO:0048868	pollen tube development	IEP	HCCA
MF	GO:0052658	inositol-1,4,5-trisphosphate 5-phosphatase activity	IEP	HCCA
MF	GO:0052745	inositol phosphate phosphatase activity	IEP	HCCA
MF	GO:0052866	phosphatidylinositol phosphate phosphatase activity	IEP	HCCA
BP	GO:0055069	zinc ion homeostasis	IEP	HCCA
BP	GO:0055076	transition metal ion homeostasis	IEP	HCCA
BP	GO:0071545	inositol phosphate catabolic process	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
BP	GO:0090701	specification of plant organ identity	IEP	HCCA
MF	GO:0106019	phosphatidylinositol-4,5-bisphosphate phosphatase activity	IEP	HCCA
MF	GO:0140358	P-type transmembrane transporter activity	IEP	HCCA
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005512	PRONE_dom	92	439

External Links

No external refs found!

AT1G79860 (ROPGEF12, MEE64, ATROPGEF12)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation