Aliases : LZF1, STH3, DBB3
Description : light-regulated zinc finger protein 1
Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g045633 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g49135 | No alias | BBX class-IV transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g14676 | STO | BBX class-IV transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0003.g008055 | LZF1, STH3, DBB3 | BBX class-IV transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g01876 | LZF1, STH3, DBB3 | BBX class-IV transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Gb_35653 | No alias | B-box zinc finger protein 18 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g05890.1 | LZF1, STH3,... | transcription factor (BBX-DBB) | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g05286 | LZF1, STH3, DBB3 | BBX class-IV transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g19854 | LZF1, STH3, DBB3 | BBX class-IV transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo438224 | No alias | No description available | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g089240.2.1 | STH2, Solyc12g089240 | transcription factor (BBX-DBB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e007720_P001 | STO, Zm00001e007720 | transcription factor (BBX-DBB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e010221_P001 | Zm00001e010221 | transcription factor (BBX-DBB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e022915_P001 | STO, Zm00001e022915 | transcription factor (BBX-DBB) | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000165 | MAPK cascade | RCA | Interproscan |
MF | GO:0003700 | DNA-binding transcription factor activity | ISS | Interproscan |
MF | GO:0005515 | protein binding | IPI | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | RCA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | TAS | Interproscan |
BP | GO:0006612 | protein targeting to membrane | RCA | Interproscan |
MF | GO:0008270 | zinc ion binding | ISS | Interproscan |
BP | GO:0009617 | response to bacterium | RCA | Interproscan |
BP | GO:0009641 | shade avoidance | IMP | Interproscan |
BP | GO:0009641 | shade avoidance | IGI | Interproscan |
BP | GO:0009658 | chloroplast organization | IMP | Interproscan |
BP | GO:0009718 | anthocyanin-containing compound biosynthetic process | IMP | Interproscan |
BP | GO:0009718 | anthocyanin-containing compound biosynthetic process | RCA | Interproscan |
BP | GO:0009862 | systemic acquired resistance, salicylic acid mediated signaling pathway | RCA | Interproscan |
BP | GO:0009867 | jasmonic acid mediated signaling pathway | RCA | Interproscan |
BP | GO:0010099 | regulation of photomorphogenesis | IGI | Interproscan |
BP | GO:0010310 | regulation of hydrogen peroxide metabolic process | RCA | Interproscan |
BP | GO:0010363 | regulation of plant-type hypersensitive response | RCA | Interproscan |
BP | GO:0015995 | chlorophyll biosynthetic process | IMP | Interproscan |
CC | GO:0016607 | nuclear speck | IDA | Interproscan |
BP | GO:0031348 | negative regulation of defense response | RCA | Interproscan |
BP | GO:0035304 | regulation of protein dephosphorylation | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
MF | GO:0005217 | intracellular ligand-gated monoatomic ion channel activity | IEP | HCCA |
CC | GO:0005654 | nucleoplasm | IEP | HCCA |
BP | GO:0006874 | cellular calcium ion homeostasis | IEP | HCCA |
BP | GO:0006875 | cellular metal ion homeostasis | IEP | HCCA |
BP | GO:0007623 | circadian rhythm | IEP | HCCA |
BP | GO:0009637 | response to blue light | IEP | HCCA |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
BP | GO:0009908 | flower development | IEP | HCCA |
BP | GO:0010218 | response to far red light | IEP | HCCA |
BP | GO:0010378 | temperature compensation of the circadian clock | IEP | HCCA |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
MF | GO:0015267 | channel activity | IEP | HCCA |
MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | HCCA |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | HCCA |
MF | GO:0022834 | ligand-gated channel activity | IEP | HCCA |
MF | GO:0022836 | gated channel activity | IEP | HCCA |
MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0042752 | regulation of circadian rhythm | IEP | HCCA |
BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0048511 | rhythmic process | IEP | HCCA |
BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
BP | GO:0048571 | long-day photoperiodism | IEP | HCCA |
BP | GO:0048573 | photoperiodism, flowering | IEP | HCCA |
BP | GO:0048574 | long-day photoperiodism, flowering | IEP | HCCA |
BP | GO:0048578 | positive regulation of long-day photoperiodism, flowering | IEP | HCCA |
BP | GO:0048582 | positive regulation of post-embryonic development | IEP | HCCA |
BP | GO:0048584 | positive regulation of response to stimulus | IEP | HCCA |
BP | GO:0048586 | regulation of long-day photoperiodism, flowering | IEP | HCCA |
BP | GO:0051094 | positive regulation of developmental process | IEP | HCCA |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051240 | positive regulation of multicellular organismal process | IEP | HCCA |
BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0055065 | metal ion homeostasis | IEP | HCCA |
BP | GO:0055074 | calcium ion homeostasis | IEP | HCCA |
BP | GO:0080167 | response to karrikin | IEP | HCCA |
BP | GO:0090567 | reproductive shoot system development | IEP | HCCA |
BP | GO:0098771 | inorganic ion homeostasis | IEP | HCCA |
BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | HCCA |
BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2000028 | regulation of photoperiodism, flowering | IEP | HCCA |
BP | GO:2000243 | positive regulation of reproductive process | IEP | HCCA |
No external refs found! |