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  5. AT1G78170

AT1G78170


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22250.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001517 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001517_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G78170
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00161690 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT1G22250 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.06 OrthoFinder output from all 47 species
Adi_g024371 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024372 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20660 No alias regulatory protein *(CFL) of cutin and suberin... 0.03 OrthoFinder output from all 47 species
Ala_g23622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01453 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02339 No alias regulatory protein *(CFL) of cutin and suberin... 0.03 OrthoFinder output from all 47 species
Als_g04681 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g19845 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g05807 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g06734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06554.t1 Aspi01Gene06554 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10926.t1 Aspi01Gene10926 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene48908.t1 Aspi01Gene48908 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene50293.t1 Aspi01Gene50293 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0277.g061498 No alias not classified & original description: CDS=447-1262 0.06 OrthoFinder output from all 47 species
Dac_g15672 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000957001 No alias Cell wall.cutin and suberin.biosynthesis regulation.CFL regulator 0.04 OrthoFinder output from all 47 species
GSVIVT01009025001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01013547001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_27782 No alias CFL cutin and suberin biosynthesis regulator 0.03 OrthoFinder output from all 47 species
Gb_29101 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_35362 No alias CFL cutin and suberin biosynthesis regulator 0.08 OrthoFinder output from all 47 species
LOC_Os03g09120.1 LOC_Os03g09120 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g18940.1 LOC_Os11g18940 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os12g13100.1 LOC_Os12g13100 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_22755g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
MA_941055g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Nbi_g11303 No alias regulatory protein *(CFL) of cutin and suberin... 0.03 OrthoFinder output from all 47 species
Ore_g11476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02856 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18018 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003730 No alias not classified & original description: CDS=19-150 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004010 No alias not classified & original description: CDS=173-733 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007227 No alias not classified & original description: CDS=156-944 0.03 OrthoFinder output from all 47 species
Sam_g19849 No alias regulatory protein *(CFL) of cutin and suberin... 0.04 OrthoFinder output from all 47 species
Sam_g34575 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g39438 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g074080.3.1 Solyc04g074080 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Tin_g29395 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e014649_P001 Zm00001e014649 CFL cutin and suberin biosynthesis regulator 0.03 OrthoFinder output from all 47 species
Zm00001e017869_P001 Zm00001e017869 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e024303_P001 Zm00001e024303 CFL cutin and suberin biosynthesis regulator 0.03 OrthoFinder output from all 47 species
Zm00001e038823_P001 Zm00001e038823 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e039814_P001 Zm00001e039814 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000038 very long-chain fatty acid metabolic process IEP HCCA
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0003002 regionalization IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004806 triglyceride lipase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
CC GO:0009331 glycerol-3-phosphate dehydrogenase complex IEP HCCA
BP GO:0009413 response to flooding IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009808 lignin metabolic process IEP HCCA
BP GO:0009809 lignin biosynthetic process IEP HCCA
CC GO:0009897 external side of plasma membrane IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
BP GO:0010025 wax biosynthetic process IEP HCCA
BP GO:0010091 trichome branching IEP HCCA
BP GO:0010093 specification of floral organ identity IEP HCCA
BP GO:0010166 wax metabolic process IEP HCCA
BP GO:0010222 stem vascular tissue pattern formation IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
MF GO:0015245 fatty acid transmembrane transporter activity IEP HCCA
BP GO:0015908 fatty acid transport IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0042335 cuticle development IEP HCCA
BP GO:0042761 very long-chain fatty acid biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044550 secondary metabolite biosynthetic process IEP HCCA
MF GO:0045551 cinnamyl-alcohol dehydrogenase activity IEP HCCA
BP GO:0048507 meristem development IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:0080051 cutin transport IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0090701 specification of plant organ identity IEP HCCA
CC GO:0098552 side of membrane IEP HCCA
BP GO:1901568 fatty acid derivative metabolic process IEP HCCA
BP GO:1901570 fatty acid derivative biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:2000038 regulation of stomatal complex development IEP HCCA
BP GO:2000122 negative regulation of stomatal complex development IEP HCCA

No InterPro domains available for this sequence

No external refs found!