AT1G77840

Description : Translation initiation factor IF2/IF5

Gene families : OG0001055 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001055_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G77840
Cluster	HCCA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
Als_g38121	No alias	activating factor *(eIF5) of eIF2-GTP hydrolysis &...	0.02	OrthoFinder output from all 47 species
Als_g40115	No alias	activating factor *(eIF5) of eIF2-GTP hydrolysis &...	0.03	OrthoFinder output from all 47 species
Aop_g05852	No alias	activating factor *(eIF5) of eIF2-GTP hydrolysis &...	0.02	OrthoFinder output from all 47 species
Aop_g10000	No alias	activating factor *(eIF5) of eIF2-GTP hydrolysis &...	0.04	OrthoFinder output from all 47 species
Dac_g10531	No alias	activating factor *(eIF5) of eIF2-GTP hydrolysis &...	0.03	OrthoFinder output from all 47 species
Dde_g02836	No alias	activating factor *(eIF5) of eIF2-GTP hydrolysis &...	0.02	OrthoFinder output from all 47 species
Ehy_g05821	No alias	activating factor *(eIF5) of eIF2-GTP hydrolysis &...	0.04	OrthoFinder output from all 47 species
Len_g22322	No alias	activating factor *(eIF5) of eIF2-GTP hydrolysis &...	0.02	OrthoFinder output from all 47 species
Pnu_g20296	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g02171	No alias	activating factor *(eIF5) of eIF2-GTP hydrolysis &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003743	translation initiation factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
BP	GO:0006417	regulation of translation	None	Extended
BP	GO:0006446	regulation of translational initiation	ISS	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006865	amino acid transport	RCA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0015849	organic acid transport	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0034248	regulation of amide metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001666	response to hypoxia	IEP	HCCA
BP	GO:0001763	morphogenesis of a branching structure	IEP	HCCA
MF	GO:0004644	phosphoribosylglycinamide formyltransferase activity	IEP	HCCA
MF	GO:0005344	oxygen carrier activity	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
MF	GO:0008864	formyltetrahydrofolate deformylase activity	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0010200	response to chitin	IEP	HCCA
BP	GO:0010223	secondary shoot formation	IEP	HCCA
BP	GO:0010243	response to organonitrogen compound	IEP	HCCA
BP	GO:0010346	shoot axis formation	IEP	HCCA
BP	GO:0015669	gas transport	IEP	HCCA
BP	GO:0015671	oxygen transport	IEP	HCCA
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
BP	GO:0019321	pentose metabolic process	IEP	HCCA
BP	GO:0036293	response to decreased oxygen levels	IEP	HCCA
BP	GO:0042732	D-xylose metabolic process	IEP	HCCA
BP	GO:0070482	response to oxygen levels	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003307	W2_domain	357	436
IPR002735	Transl_init_fac_IF2/IF5_dom	10	127

External Links

No external refs found!

AT1G77840

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation