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  5. AT1G68820

AT1G68820


Description : Transmembrane Fragile-X-F-associated protein


Gene families : OG0004649 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004649_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G68820

Target Alias Description ECC score Gene Family Method Actions
Ala_g02106 No alias E3 ubiquitin ligase *(PPRT) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g20874 No alias E3 ubiquitin ligase *(PPRT) & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g21510.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g25510 No alias E3 ubiquitin ligase *(PPRT) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g009870.4.1 Solyc05g009870 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP HCCA
BP GO:0000303 response to superoxide IEP HCCA
BP GO:0000305 response to oxygen radical IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0004707 MAP kinase activity IEP HCCA
MF GO:0005217 intracellular ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0005388 P-type calcium transporter activity IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006714 sesquiterpenoid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006874 cellular calcium ion homeostasis IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0006972 hyperosmotic response IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008265 Mo-molybdopterin cofactor sulfurase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0008643 carbohydrate transport IEP HCCA
MF GO:0009000 selenocysteine lyase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009687 abscisic acid metabolic process IEP HCCA
BP GO:0009688 abscisic acid biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009723 response to ethylene IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009734 auxin-activated signaling pathway IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009753 response to jasmonic acid IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010260 obsolete animal organ senescence IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015085 calcium ion transmembrane transporter activity IEP HCCA
MF GO:0015145 monosaccharide transmembrane transporter activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015662 P-type ion transporter activity IEP HCCA
BP GO:0015749 monosaccharide transmembrane transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016106 sesquiterpenoid biosynthetic process IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016783 sulfurtransferase activity IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
BP GO:0018315 molybdenum incorporation into molybdenum-molybdopterin complex IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0034219 carbohydrate transmembrane transport IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0042040 metal incorporation into metallo-molybdopterin complex IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042538 hyperosmotic salinity response IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
BP GO:0043288 apocarotenoid metabolic process IEP HCCA
BP GO:0043289 apocarotenoid biosynthetic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0045037 protein import into chloroplast stroma IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0050734 hydroxycinnamoyltransferase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070542 response to fatty acid IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0098754 detoxification IEP HCCA
MF GO:0140358 P-type transmembrane transporter activity IEP HCCA
BP GO:1900055 regulation of leaf senescence IEP HCCA
BP GO:1900057 positive regulation of leaf senescence IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:1902644 tertiary alcohol metabolic process IEP HCCA
BP GO:1902645 tertiary alcohol biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019396 TM_Fragile-X-F-assoc 35 295
No external refs found!