Aliases : RBCS1A
Description : ribulose bisphosphate carboxylase small chain 1A
Gene families : OG0000735 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000735_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00079p00061090 | evm_27.TU.AmTr_v1... | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.19 | OrthoFinder output from all 47 species | |
Ala_g09842 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.11 | OrthoFinder output from all 47 species | |
Aob_g24117 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species | |
Aob_g33021 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.12 | OrthoFinder output from all 47 species | |
Aob_g41554 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g21743 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene45745.t1 | RBCS1A, Aspi01Gene45745 | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.09G050600.1 | RBCS1A, Ceric.09G050600 | small subunit of ribulose-1,5-bisphosphat... | 0.2 | OrthoFinder output from all 47 species | |
Ceric.09G050700.1 | RBCS1A, Ceric.09G050700 | small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.09G050800.1 | RBCS1A, Ceric.09G050800 | small subunit of ribulose-1,5-bisphosphat... | 0.11 | OrthoFinder output from all 47 species | |
Ceric.09G050900.1 | RBCS1A, Ceric.09G050900 | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.09G051100.1 | RBCS1A, Ceric.09G051100 | small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.09G051300.1 | RBCS1A, Ceric.09G051300 | small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.09G051400.1 | RBCS1A, Ceric.09G051400 | small subunit of ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.09G051600.1 | RBCS1A, Ceric.09G051600 | small subunit of ribulose-1,5-bisphosphat... | 0.14 | OrthoFinder output from all 47 species | |
Ceric.09G051700.1 | RBCS1A, Ceric.09G051700 | small subunit of ribulose-1,5-bisphosphat... | 0.09 | OrthoFinder output from all 47 species | |
Ceric.09G051800.1 | RBCS1A, Ceric.09G051800 | small subunit of ribulose-1,5-bisphosphat... | 0.12 | OrthoFinder output from all 47 species | |
Ceric.09G051900.1 | RBCS1A, Ceric.09G051900 | small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
Cre02.g120100 | RBCS1A | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
Cre02.g120150 | RBCS1A | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g20638 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.12 | OrthoFinder output from all 47 species | |
Dcu_g33446 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.12 | OrthoFinder output from all 47 species | |
Dcu_g51202 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.12 | OrthoFinder output from all 47 species | |
Dde_g36766 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.18 | OrthoFinder output from all 47 species | |
Ehy_g04204 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.12 | OrthoFinder output from all 47 species | |
Ehy_g14905 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01008288001 | No alias | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.13 | OrthoFinder output from all 47 species | |
Gb_00380 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.23 | OrthoFinder output from all 47 species | |
Gb_00381 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os12g17600.1 | RBCS1A, LOC_Os12g17600 | small subunit of ribulose-1,5-bisphosphat... | 0.18 | OrthoFinder output from all 47 species | |
LOC_Os12g19381.1 | RBCS1A, LOC_Os12g19381 | small subunit of ribulose-1,5-bisphosphat... | 0.18 | OrthoFinder output from all 47 species | |
LOC_Os12g19470.2 | RBCS1A, LOC_Os12g19470 | small subunit of ribulose-1,5-bisphosphat... | 0.11 | OrthoFinder output from all 47 species | |
MA_47626g0010 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.13 | OrthoFinder output from all 47 species | |
Mp4g06020.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species | |
Mp4g06030.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
Mp4g06050.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.1 | OrthoFinder output from all 47 species | |
Mp4g10850.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.08 | OrthoFinder output from all 47 species | |
Mp4g15070.1 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g16796 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.15 | OrthoFinder output from all 47 species | |
Pir_g54622 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.15 | OrthoFinder output from all 47 species | |
Pir_g63695 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g12024 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
Pp3c13_15786V3.1 | Pp3c13_15786 | No annotation | 0.02 | OrthoFinder output from all 47 species | |
Pp3c13_15910V3.1 | RBCS1A, Pp3c13_15910 | ribulose bisphosphate carboxylase small chain 1A | 0.01 | OrthoFinder output from all 47 species | |
Pp3c19_1840V3.1 | RBCS1A, Pp3c19_1840 | Ribulose bisphosphate carboxylase (small chain) family protein | 0.01 | OrthoFinder output from all 47 species | |
Pp3c3_14510V3.1 | RBCS1A, Pp3c3_14510 | ribulose bisphosphate carboxylase small chain 1A | 0.05 | OrthoFinder output from all 47 species | |
Pp3c3_20140V3.1 | RBCS1A, Pp3c3_20140 | ribulose bisphosphate carboxylase small chain 1A | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g31547 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g31548 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g32726 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.07 | OrthoFinder output from all 47 species | |
Ppi_g60704 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0124.g021603 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g23016 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.17 | OrthoFinder output from all 47 species | |
Sam_g36381 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.09 | OrthoFinder output from all 47 species | |
Smo147927 | No alias | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.1 | OrthoFinder output from all 47 species | |
Solyc02g063150.3.1 | Solyc02g063150 | small subunit of ribulose-1,5-bisphosphat... | 0.23 | OrthoFinder output from all 47 species | |
Solyc02g085950.4.1 | Solyc02g085950 | small subunit of ribulose-1,5-bisphosphat... | 0.17 | OrthoFinder output from all 47 species | |
Solyc03g034220.3.1 | Solyc03g034220 | small subunit of ribulose-1,5-bisphosphat... | 0.16 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005507 | copper ion binding | IDA | Interproscan |
BP | GO:0009409 | response to cold | IEP | Interproscan |
CC | GO:0009507 | chloroplast | IDA | Interproscan |
CC | GO:0009507 | chloroplast | ISM | Interproscan |
CC | GO:0009535 | chloroplast thylakoid membrane | IDA | Interproscan |
CC | GO:0009570 | chloroplast stroma | IDA | Interproscan |
CC | GO:0009573 | chloroplast ribulose bisphosphate carboxylase complex | ISS | Interproscan |
CC | GO:0009579 | thylakoid | IDA | Interproscan |
BP | GO:0009637 | response to blue light | IEP | Interproscan |
CC | GO:0009941 | chloroplast envelope | IDA | Interproscan |
BP | GO:0010114 | response to red light | IEP | Interproscan |
BP | GO:0010218 | response to far red light | IEP | Interproscan |
BP | GO:0015977 | carbon fixation | ISS | Interproscan |
BP | GO:0015979 | photosynthesis | IMP | Interproscan |
CC | GO:0016020 | membrane | IDA | Interproscan |
MF | GO:0016984 | ribulose-bisphosphate carboxylase activity | ISS | Interproscan |
CC | GO:0022626 | cytosolic ribosome | IDA | Interproscan |
CC | GO:0031977 | thylakoid lumen | IDA | Interproscan |
CC | GO:0048046 | apoplast | IDA | Interproscan |
BP | GO:0080158 | obsolete chloroplast ribulose bisphosphate carboxylase complex biogenesis | IMP | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
BP | GO:0002229 | defense response to oomycetes | IEP | HCCA |
BP | GO:0002239 | response to oomycetes | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0004601 | peroxidase activity | IEP | HCCA |
BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006544 | glycine metabolic process | IEP | HCCA |
BP | GO:0006546 | glycine catabolic process | IEP | HCCA |
BP | GO:0006605 | protein targeting | IEP | HCCA |
BP | GO:0006636 | unsaturated fatty acid biosynthetic process | IEP | HCCA |
BP | GO:0006733 | obsolete oxidoreduction coenzyme metabolic process | IEP | HCCA |
BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | HCCA |
BP | GO:0006766 | vitamin metabolic process | IEP | HCCA |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0006833 | water transport | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
BP | GO:0006952 | defense response | IEP | HCCA |
BP | GO:0006970 | response to osmotic stress | IEP | HCCA |
MF | GO:0008047 | enzyme activator activity | IEP | HCCA |
BP | GO:0008104 | protein localization | IEP | HCCA |
BP | GO:0009071 | serine family amino acid catabolic process | IEP | HCCA |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | HCCA |
BP | GO:0009106 | lipoate metabolic process | IEP | HCCA |
BP | GO:0009108 | obsolete coenzyme biosynthetic process | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009595 | detection of biotic stimulus | IEP | HCCA |
BP | GO:0009605 | response to external stimulus | IEP | HCCA |
BP | GO:0009607 | response to biotic stimulus | IEP | HCCA |
BP | GO:0009617 | response to bacterium | IEP | HCCA |
BP | GO:0009642 | response to light intensity | IEP | HCCA |
BP | GO:0009643 | photosynthetic acclimation | IEP | HCCA |
BP | GO:0009644 | response to high light intensity | IEP | HCCA |
BP | GO:0009651 | response to salt stress | IEP | HCCA |
BP | GO:0009695 | jasmonic acid biosynthetic process | IEP | HCCA |
BP | GO:0009696 | salicylic acid metabolic process | IEP | HCCA |
BP | GO:0009697 | salicylic acid biosynthetic process | IEP | HCCA |
BP | GO:0009743 | response to carbohydrate | IEP | HCCA |
BP | GO:0009744 | response to sucrose | IEP | HCCA |
BP | GO:0009746 | response to hexose | IEP | HCCA |
BP | GO:0009749 | response to glucose | IEP | HCCA |
BP | GO:0009750 | response to fructose | IEP | HCCA |
BP | GO:0009767 | photosynthetic electron transport chain | IEP | HCCA |
BP | GO:0009773 | photosynthetic electron transport in photosystem I | IEP | HCCA |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
BP | GO:0010033 | response to organic substance | IEP | HCCA |
BP | GO:0010103 | stomatal complex morphogenesis | IEP | HCCA |
BP | GO:0010155 | regulation of proton transport | IEP | HCCA |
BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
BP | GO:0010310 | regulation of hydrogen peroxide metabolic process | IEP | HCCA |
CC | GO:0010319 | stromule | IEP | HCCA |
BP | GO:0010555 | response to mannitol | IEP | HCCA |
BP | GO:0010726 | positive regulation of hydrogen peroxide metabolic process | IEP | HCCA |
BP | GO:0010728 | regulation of hydrogen peroxide biosynthetic process | IEP | HCCA |
BP | GO:0010729 | positive regulation of hydrogen peroxide biosynthetic process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0015995 | chlorophyll biosynthetic process | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
MF | GO:0016209 | antioxidant activity | IEP | HCCA |
MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
BP | GO:0017014 | protein nitrosylation | IEP | HCCA |
BP | GO:0018119 | peptidyl-cysteine S-nitrosylation | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018198 | peptidyl-cysteine modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0018958 | phenol-containing compound metabolic process | IEP | HCCA |
BP | GO:0019253 | reductive pentose-phosphate cycle | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
BP | GO:0019684 | photosynthesis, light reaction | IEP | HCCA |
BP | GO:0019685 | photosynthesis, dark reaction | IEP | HCCA |
BP | GO:0019748 | secondary metabolic process | IEP | HCCA |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0022900 | electron transport chain | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0032879 | regulation of localization | IEP | HCCA |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | HCCA |
BP | GO:0033036 | macromolecule localization | IEP | HCCA |
BP | GO:0033559 | unsaturated fatty acid metabolic process | IEP | HCCA |
BP | GO:0034284 | response to monosaccharide | IEP | HCCA |
BP | GO:0034285 | response to disaccharide | IEP | HCCA |
BP | GO:0034762 | regulation of transmembrane transport | IEP | HCCA |
BP | GO:0034765 | regulation of monoatomic ion transmembrane transport | IEP | HCCA |
BP | GO:0042044 | fluid transport | IEP | HCCA |
BP | GO:0042221 | response to chemical | IEP | HCCA |
BP | GO:0042537 | benzene-containing compound metabolic process | IEP | HCCA |
BP | GO:0042742 | defense response to bacterium | IEP | HCCA |
BP | GO:0043085 | positive regulation of catalytic activity | IEP | HCCA |
BP | GO:0043207 | response to external biotic stimulus | IEP | HCCA |
BP | GO:0043269 | regulation of monoatomic ion transport | IEP | HCCA |
BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
BP | GO:0043900 | obsolete regulation of multi-organism process | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044093 | positive regulation of molecular function | IEP | HCCA |
BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
BP | GO:0044419 | biological process involved in interspecies interaction between organisms | IEP | HCCA |
BP | GO:0045036 | protein targeting to chloroplast | IEP | HCCA |
BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
BP | GO:0046189 | phenol-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051049 | regulation of transport | IEP | HCCA |
BP | GO:0051707 | response to other organism | IEP | HCCA |
MF | GO:0051920 | peroxiredoxin activity | IEP | HCCA |
BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
BP | GO:0072596 | establishment of protein localization to chloroplast | IEP | HCCA |
BP | GO:0072598 | protein localization to chloroplast | IEP | HCCA |
BP | GO:0090626 | plant epidermis morphogenesis | IEP | HCCA |
BP | GO:0098542 | defense response to other organism | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
BP | GO:1901700 | response to oxygen-containing compound | IEP | HCCA |
BP | GO:1903426 | regulation of reactive oxygen species biosynthetic process | IEP | HCCA |
BP | GO:1903428 | positive regulation of reactive oxygen species biosynthetic process | IEP | HCCA |
BP | GO:1904062 | regulation of monoatomic cation transmembrane transport | IEP | HCCA |
BP | GO:2000377 | regulation of reactive oxygen species metabolic process | IEP | HCCA |
BP | GO:2000379 | positive regulation of reactive oxygen species metabolic process | IEP | HCCA |
No external refs found! |