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  5. AT1G64450

AT1G64450


Description : Glycine-rich protein family


Gene families : OG0000463 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000463_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G64450
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00241150 evm_27.TU.AmTr_v1... No description available 0.08 OrthoFinder output from all 47 species
AMTR_s00077p00180520 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g36982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g23119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58684.t1 Aspi01Gene58684 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G048500.1 Ceric.18G048500 not classified & original description: pacid=50622192... 0.08 OrthoFinder output from all 47 species
Dac_g12719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03594 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g49001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035190001 No alias No description available 0.02 OrthoFinder output from all 47 species
Len_g36133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g53705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05855 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp3g06270.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g13106 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g33842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006134 No alias not classified & original description: CDS=1-957 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020255 No alias not classified & original description: CDS=1-648 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021326 No alias not classified & original description: CDS=1-645 0.03 OrthoFinder output from all 47 species
Solyc08g082470.1.1 Solyc08g082470 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Spa_g10584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27677 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g04394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010492_P001 Zm00001e010492 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e027143_P001 Zm00001e027143 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e027455_P001 Zm00001e027455 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0048451 petal formation RCA Interproscan
BP GO:0048453 sepal formation RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000280 nuclear division IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
MF GO:0001872 (1->3)-beta-D-glucan binding IEP HCCA
BP GO:0003002 regionalization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007000 nucleolus organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010016 shoot system morphogenesis IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016572 obsolete histone phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0030054 cell junction IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0031048 RNA-mediated heterochromatin formation IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0031507 heterochromatin formation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0035173 histone kinase activity IEP HCCA
MF GO:0035184 histone threonine kinase activity IEP HCCA
MF GO:0035402 histone H3T11 kinase activity IEP HCCA
BP GO:0035407 obsolete histone H3-T11 phosphorylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0046283 anthocyanin-containing compound metabolic process IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
BP GO:0048439 flower morphogenesis IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0052386 cell wall thickening IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0072354 histone H3T3 kinase activity IEP HCCA
BP GO:0072355 obsolete histone H3-T3 phosphorylation IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:0140718 facultative heterochromatin formation IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA

No InterPro domains available for this sequence

No external refs found!