AT1G64230 (UBC28)


Aliases : UBC28

Description : ubiquitin-conjugating enzyme 28


Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G64230
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00068850 ATUBC11, UBC11,... Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
Als_g00339 EMB144, CIN4, COP10, FUS9 component *(COP10) of CDDD substrate adaptor module of... 0.01 OrthoFinder output from all 47 species
Als_g06450 UBC9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g10989 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23200 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39862 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Als_g43928 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09895 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0032.g024984 UBC10 E2 MUB ubiquitin-conjugating enzyme & original... 0.03 OrthoFinder output from all 47 species
Cba_g01661 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09626 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11804 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19798 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g27631 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g70824 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Cre16.g693700 UBC10 Protein degradation.peptide... 0.01 OrthoFinder output from all 47 species
Dac_g21793 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g07349 UBC30 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03167 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01014758001 UBC10 Protein degradation.peptide... 0.02 OrthoFinder output from all 47 species
GSVIVT01024546001 UBC10 Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
LOC_Os01g46926.1 UBC9, LOC_Os01g46926 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
LOC_Os02g16040.1 UBC10, LOC_Os02g16040 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Len_g18731 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23404 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g31742 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Mp5g21800.1 UBC10 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Mp7g03500.1 EMB144, CIN4, COP10, FUS9 conjugation E2 protein. E2 conjugating component COP10... 0.02 OrthoFinder output from all 47 species
Pir_g41767 UBC10 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g27668 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14975 No alias E2 MUB ubiquitin-conjugating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Smo228916 UBC9 Protein degradation.peptide... 0.02 OrthoFinder output from all 47 species
Solyc06g007510.3.1 UBC10, Solyc06g007510 conjugation E2 protein 0.02 OrthoFinder output from all 47 species
Solyc07g066080.3.1 ATUBC11, UBC11,... conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Solyc08g081945.1.1 UBC10, Solyc08g081945 conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Spa_g05700 ATUBC11, UBC11 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45237 UBC9 E2 MUB ubiquitin-conjugating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e033719_P001 UBC10, Zm00001e033719 conjugation E2 protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Interproscan
MF GO:0004842 ubiquitin-protein transferase activity ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006301 postreplication repair RCA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IDA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process RCA Interproscan
BP GO:0006635 fatty acid beta-oxidation RCA Interproscan
BP GO:0016558 protein import into peroxisome matrix RCA Interproscan
BP GO:0042023 DNA endoreduplication RCA Interproscan
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process RCA Interproscan
BP GO:0043248 proteasome assembly RCA Interproscan
BP GO:0044265 cellular macromolecule catabolic process RCA Interproscan
BP GO:0048193 Golgi vesicle transport RCA Interproscan
BP GO:0051510 regulation of unidimensional cell growth RCA Interproscan
BP GO:0051788 response to misfolded protein RCA Interproscan
Type GO Term Name Evidence Source
MF GO:0003868 4-hydroxyphenylpyruvate dioxygenase activity IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0004075 biotin carboxylase activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006551 leucine metabolic process IEP HCCA
BP GO:0006552 leucine catabolic process IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006775 fat-soluble vitamin metabolic process IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008824 cyanate hydratase activity IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009083 branched-chain amino acid catabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009439 cyanate metabolic process IEP HCCA
BP GO:0009440 cyanate catabolic process IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009651 response to salt stress IEP HCCA
BP GO:0009734 auxin-activated signaling pathway IEP HCCA
BP GO:0009742 brassinosteroid mediated signaling pathway IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009746 response to hexose IEP HCCA
BP GO:0009750 response to fructose IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009838 abscission IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0009896 positive regulation of catabolic process IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
BP GO:0009954 proximal/distal pattern formation IEP HCCA
BP GO:0010189 vitamin E biosynthetic process IEP HCCA
BP GO:0010227 floral organ abscission IEP HCCA
BP GO:0010236 plastoquinone biosynthetic process IEP HCCA
BP GO:0010268 brassinosteroid homeostasis IEP HCCA
BP GO:0010506 regulation of autophagy IEP HCCA
BP GO:0010508 positive regulation of autophagy IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010623 programmed cell death involved in cell development IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0015976 carbon utilization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0031329 regulation of cellular catabolic process IEP HCCA
BP GO:0031331 positive regulation of cellular catabolic process IEP HCCA
CC GO:0031463 Cul3-RING ubiquitin ligase complex IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
BP GO:0034284 response to monosaccharide IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0040020 regulation of meiotic nuclear division IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
BP GO:0042360 vitamin E metabolic process IEP HCCA
BP GO:0042362 fat-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043401 steroid hormone mediated signaling pathway IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0045309 protein phosphorylated amino acid binding IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0045787 positive regulation of cell cycle IEP HCCA
BP GO:0045836 positive regulation of meiotic nuclear division IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046459 short-chain fatty acid metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0048102 autophagic cell death IEP HCCA
BP GO:0048657 anther wall tapetum cell differentiation IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
BP GO:0051017 actin filament bundle assembly IEP HCCA
MF GO:0051219 phosphoprotein binding IEP HCCA
BP GO:0051445 regulation of meiotic cell cycle IEP HCCA
BP GO:0051446 positive regulation of meiotic cell cycle IEP HCCA
BP GO:0051783 regulation of nuclear division IEP HCCA
BP GO:0051785 positive regulation of nuclear division IEP HCCA
BP GO:0055088 lipid homeostasis IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
BP GO:0061572 actin filament bundle organization IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0090068 positive regulation of cell cycle process IEP HCCA
BP GO:0090342 obsolete regulation of cell aging IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!