AT1G63470

Description : AT hook motif DNA-binding family protein

Gene families : OG0000263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G63470
Cluster	HCCA: Cluster_123

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00254660	evm_27.TU.AmTr_v1...	AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00149p00085280	evm_27.TU.AmTr_v1...	AT-hook motif nuclear-localized protein 10...	0.09	OrthoFinder output from all 47 species
AT2G45850	No alias	AT hook motif DNA-binding family protein	0.03	OrthoFinder output from all 47 species
AT4G22770	No alias	AT hook motif DNA-binding family protein	0.04	OrthoFinder output from all 47 species
Ala_g38358	No alias	AHL clade-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g22194	No alias	AHL clade-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene56436.t1	ATAHL1, AHL1,...	AHL clade-B transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene61519.t1	ATAHL1, AHL1,...	AHL clade-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0006.g010299	ATAHL1, AHL1	AHL clade-B transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.16G069600.1	Ceric.16G069600	AHL clade-B transcription factor & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.34G016000.1	Ceric.34G016000	AHL clade-B transcription factor & original description:...	0.1	OrthoFinder output from all 47 species
Ceric.38G025900.1	Ceric.38G025900	AHL clade-B transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dcu_g11337	No alias	AHL clade-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g25460	No alias	AHL clade-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01013426001	No alias	AT-hook motif nuclear-localized protein 10...	0.07	OrthoFinder output from all 47 species
GSVIVT01026888001	No alias	AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01027617001	ATAHL1, AHL1	AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
LOC_Os02g57820.1	LOC_Os02g57820	AT-hook motif nuclear-localized protein 9 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
LOC_Os10g42230.2	LOC_Os10g42230	AT-hook motif nuclear-localized protein 10...	0.06	OrthoFinder output from all 47 species
Len_g18915	No alias	AHL clade-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g20725	ATAHL1, AHL1	AHL clade-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_10434727g0010	No alias	AT-hook motif nuclear-localized protein 1 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_359293g0010	No alias	AT-hook motif nuclear-localized protein 10...	0.03	OrthoFinder output from all 47 species
Nbi_g04171	No alias	AHL clade-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0163.g024013	No alias	AHL clade-B transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Smo410086	No alias	AT-hook motif nuclear-localized protein 10...	0.02	OrthoFinder output from all 47 species
Solyc08g008030.3.1	Solyc08g008030	AT-hook motif nuclear-localized protein 5 OS=Arabidopsis...	0.09	OrthoFinder output from all 47 species
Solyc08g079630.3.1	ATAHL1, AHL1,...	AT-hook motif nuclear-localized protein 1 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc08g080960.4.1	Solyc08g080960	AT-hook motif nuclear-localized protein 5 OS=Arabidopsis...	0.06	OrthoFinder output from all 47 species
Solyc12g094710.2.1	Solyc12g094710	AT-hook motif nuclear-localized protein 10...	0.06	OrthoFinder output from all 47 species
Spa_g00865	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g45097	No alias	AHL clade-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e002444_P001	Zm00001e002444	AT-hook motif nuclear-localized protein 10...	0.04	OrthoFinder output from all 47 species
Zm00001e009148_P001	ATAHL1, AHL1,...	AT-hook motif nuclear-localized protein 1 OS=Arabidopsis...	0.08	OrthoFinder output from all 47 species
Zm00001e016260_P002	Zm00001e016260	AT-hook motif nuclear-localized protein 9 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Zm00001e023546_P003	Zm00001e023546	AT-hook motif nuclear-localized protein 9 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e037798_P002	Zm00001e037798	AT-hook motif nuclear-localized protein 10...	0.07	OrthoFinder output from all 47 species
Zm00001e041401_P002	Zm00001e041401	AT-hook motif nuclear-localized protein 1 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000226	microtubule cytoskeleton organization	RCA	Interproscan
BP	GO:0000280	nuclear division	RCA	Interproscan
BP	GO:0000910	cytokinesis	None	Extended
BP	GO:0000911	cytokinesis by cell plate formation	RCA	Interproscan
BP	GO:0002376	immune system process	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	RCA	Interproscan
BP	GO:0006304	DNA modification	None	Extended
BP	GO:0006305	DNA alkylation	None	Extended
BP	GO:0006306	DNA methylation	RCA	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006338	chromatin remodeling	None	Extended
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	RCA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0006955	immune response	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0006997	nucleus organization	None	Extended
BP	GO:0007000	nucleolus organization	RCA	Interproscan
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007017	microtubule-based process	None	Extended
BP	GO:0007051	spindle organization	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0007267	cell-cell signaling	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
BP	GO:0008283	cell population proliferation	RCA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009615	response to virus	None	Extended
BP	GO:0009616	RNAi-mediated antiviral immune response	RCA	Interproscan
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009909	regulation of flower development	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010267	ta-siRNA processing	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0010629	negative regulation of gene expression	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016441	post-transcriptional gene silencing	None	Extended
BP	GO:0016458	obsolete gene silencing	RCA	Interproscan
BP	GO:0016570	histone modification	RCA	Interproscan
BP	GO:0016571	histone methylation	RCA	Interproscan
BP	GO:0016572	obsolete histone phosphorylation	RCA	Interproscan
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0023052	signaling	None	Extended
BP	GO:0030422	siRNA processing	None	Extended
BP	GO:0031047	RNA-mediated gene silencing	RCA	Interproscan
BP	GO:0031048	RNA-mediated heterochromatin formation	RCA	Interproscan
BP	GO:0031507	heterochromatin formation	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0034968	histone lysine methylation	RCA	Interproscan
BP	GO:0035194	RNA-mediated post-transcriptional gene silencing	None	Extended
BP	GO:0035196	miRNA processing	RCA	Interproscan
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0040029	epigenetic regulation of gene expression	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0044728	DNA methylation or demethylation	None	Extended
BP	GO:0045087	innate immune response	None	Extended
BP	GO:0045814	negative regulation of gene expression, epigenetic	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048285	organelle fission	None	Extended
BP	GO:0048449	floral organ formation	RCA	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051225	spindle assembly	RCA	Interproscan
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051567	histone H3-K9 methylation	RCA	Interproscan
BP	GO:0051607	defense response to virus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0061647	histone H3-K9 modification	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070828	heterochromatin organization	None	Extended
BP	GO:0070918	regulatory ncRNA processing	None	Extended
BP	GO:0070925	organelle assembly	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0140546	defense response to symbiont	None	Extended
BP	GO:0140694	non-membrane-bounded organelle assembly	None	Extended
BP	GO:0140718	facultative heterochromatin formation	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1905393	plant organ formation	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
BP	GO:0002237	response to molecule of bacterial origin	IEP	HCCA
MF	GO:0003779	actin binding	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006270	DNA replication initiation	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0007166	cell surface receptor signaling pathway	IEP	HCCA
BP	GO:0007167	enzyme-linked receptor protein signaling pathway	IEP	HCCA
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
BP	GO:0009553	embryo sac development	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
BP	GO:0009685	gibberellin metabolic process	IEP	HCCA
BP	GO:0009686	gibberellin biosynthetic process	IEP	HCCA
BP	GO:0009718	anthocyanin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009799	specification of symmetry	IEP	HCCA
BP	GO:0009855	determination of bilateral symmetry	IEP	HCCA
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	HCCA
BP	GO:0010014	meristem initiation	IEP	HCCA
BP	GO:0010016	shoot system morphogenesis	IEP	HCCA
BP	GO:0010073	meristem maintenance	IEP	HCCA
BP	GO:0010075	regulation of meristem growth	IEP	HCCA
BP	GO:0010103	stomatal complex morphogenesis	IEP	HCCA
BP	GO:0010359	regulation of anion channel activity	IEP	HCCA
BP	GO:0010389	regulation of G2/M transition of mitotic cell cycle	IEP	HCCA
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016101	diterpenoid metabolic process	IEP	HCCA
BP	GO:0016102	diterpenoid biosynthetic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0016837	carbon-oxygen lyase activity, acting on polysaccharides	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
BP	GO:0022898	regulation of transmembrane transporter activity	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0030570	pectate lyase activity	IEP	HCCA
CC	GO:0031225	obsolete anchored component of membrane	IEP	HCCA
BP	GO:0032409	regulation of transporter activity	IEP	HCCA
BP	GO:0032411	positive regulation of transporter activity	IEP	HCCA
BP	GO:0032412	regulation of monoatomic ion transmembrane transporter activity	IEP	HCCA
BP	GO:0032414	positive regulation of ion transmembrane transporter activity	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0034764	positive regulation of transmembrane transport	IEP	HCCA
BP	GO:0034767	positive regulation of monoatomic ion transmembrane transport	IEP	HCCA
MF	GO:0035173	histone kinase activity	IEP	HCCA
MF	GO:0035184	histone threonine kinase activity	IEP	HCCA
MF	GO:0035402	histone H3T11 kinase activity	IEP	HCCA
BP	GO:0035407	obsolete histone H3-T11 phosphorylation	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043270	positive regulation of monoatomic ion transport	IEP	HCCA
BP	GO:0044070	regulation of monoatomic anion transport	IEP	HCCA
BP	GO:0046283	anthocyanin-containing compound metabolic process	IEP	HCCA
CC	GO:0046658	obsolete anchored component of plasma membrane	IEP	HCCA
BP	GO:0048437	floral organ development	IEP	HCCA
BP	GO:0048439	flower morphogenesis	IEP	HCCA
BP	GO:0048443	stamen development	IEP	HCCA
BP	GO:0048451	petal formation	IEP	HCCA
BP	GO:0048453	sepal formation	IEP	HCCA
BP	GO:0048507	meristem development	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
BP	GO:0048827	phyllome development	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051050	positive regulation of transport	IEP	HCCA
BP	GO:0071588	hydrogen peroxide mediated signaling pathway	IEP	HCCA
MF	GO:0072354	histone H3T3 kinase activity	IEP	HCCA
BP	GO:0072355	obsolete histone H3-T3 phosphorylation	IEP	HCCA
BP	GO:0090626	plant epidermis morphogenesis	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901527	abscisic acid-activated signaling pathway involved in stomatal movement	IEP	HCCA
BP	GO:1901528	hydrogen peroxide mediated signaling pathway involved in stomatal movement	IEP	HCCA
BP	GO:1901529	positive regulation of anion channel activity	IEP	HCCA
BP	GO:1901987	regulation of cell cycle phase transition	IEP	HCCA
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	HCCA
BP	GO:1902749	regulation of cell cycle G2/M phase transition	IEP	HCCA
BP	GO:1903793	positive regulation of monoatomic anion transport	IEP	HCCA
BP	GO:1903959	regulation of monoatomic anion transmembrane transport	IEP	HCCA
BP	GO:1903961	positive regulation of anion transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005175	PPC_dom	179	292

External Links

No external refs found!

AT1G63470

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation