AT1G61290 (ATSYP124, SYP124)

Aliases : ATSYP124, SYP124

Description : syntaxin of plants 124

Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G61290

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00039700	SYP111,...	Vesicle trafficking.SNARE target membrane recognition...	0.02	OrthoFinder output from all 47 species
AMTR_s00049p00050990	SYP121,...	Vesicle trafficking.SNARE target membrane recognition...	0.03	OrthoFinder output from all 47 species
AMTR_s00103p00119740	SYP111,...	Vesicle trafficking.SNARE target membrane recognition...	0.02	OrthoFinder output from all 47 species
AT3G11820	SYP121,...	syntaxin of plants 121	0.03	OrthoFinder output from all 47 species
AT3G52400	SYP122, ATSYP122	syntaxin of plants 122	0.03	OrthoFinder output from all 47 species
Ala_g08621	ATSYP124, SYP124	Qa-type SYP1-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
Als_g02333	ATSYP124, SYP124	Qa-type SYP1-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
Als_g36578	ATSYP124, SYP124	Qa-type SYP1-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Ceric.17G026900.1	ATSYP124,...	Qa-type SYP1-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
GSVIVT01030578001	ATSYP124, SYP124	Vesicle trafficking.SNARE target membrane recognition...	0.03	OrthoFinder output from all 47 species
Len_g07593	ATSYP124, SYP124	Qa-type SYP1-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
MA_28961g0010	SYP125, ATSYP125	SYP1-group Qa-type SNARE component	0.03	OrthoFinder output from all 47 species
Mp2g19600.1	SYP132, ATSYP132	SYP1-group Qa-type SNARE component	0.02	OrthoFinder output from all 47 species
Nbi_g04089	ATSYP124, SYP124	Qa-type SYP1-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
Ore_g09931	ATSYP124, SYP124	Qa-type SYP1-group component of SNARE membrane fusion...	0.04	OrthoFinder output from all 47 species
Ore_g31122	ATSYP131, SYP131	Qa-type SYP1-group component of SNARE membrane fusion...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024205	ATSYP124, SYP124	Qa-type SYP1-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
Sam_g11700	No alias	Qa-type SYP1-group component of SNARE membrane fusion...	0.02	OrthoFinder output from all 47 species
Solyc01g006950.3.1	SYP121,...	SYP1-group Qa-type SNARE component	0.03	OrthoFinder output from all 47 species
Solyc10g008570.3.1	Solyc10g008570	SYP1-group Qa-type SNARE component	0.04	OrthoFinder output from all 47 species
Solyc10g081850.3.1	SYP121,...	SYP1-group Qa-type SNARE component	0.02	OrthoFinder output from all 47 species
Solyc12g005580.2.1	ATSYP124,...	SYP1-group Qa-type SNARE component	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005484	SNAP receptor activity	TAS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	TAS	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009860	pollen tube growth	IDA	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0022414	reproductive process	None	Extended
CC	GO:0030133	transport vesicle	IDA	Interproscan
MF	GO:0030674	protein-macromolecule adaptor activity	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0040007	growth	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
MF	GO:0060090	molecular adaptor activity	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
BP	GO:0009827	plant-type cell wall modification	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006011	Syntaxin_N	33	238
IPR000727	T_SNARE_dom	240	290

External Links

No external refs found!

AT1G61290 (ATSYP124, SYP124)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation