AT1G52150 (ICU4, ATHB15, ATHB-15, CNA)

Aliases : ICU4, ATHB15, ATHB-15, CNA

Description : Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

Gene families : OG0000446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G52150

Target	Alias	Description	ECC score	Gene Family Method
Aev_g11869	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g07482	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g20866	PHB-1D, ATHB-14,...	HD-ZIP III-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g22190	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene40272.t1	ICU4, ATHB15,...	transcriptional co-regulator *(ZPR) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g22860	PHB-1D, ATHB-14,...	HD-ZIP III-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g47759	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01017010001	ICU4, ATHB15,...	RNA biosynthesis.transcriptional activation.HB...	0.05	OrthoFinder output from all 47 species
GSVIVT01025193001	IFL1, IFL, REV	RNA biosynthesis.transcriptional activation.HB...	0.06	OrthoFinder output from all 47 species
GSVIVT01035612001	ICU4, ATHB15,...	RNA biosynthesis.transcriptional activation.HB...	0.04	OrthoFinder output from all 47 species
Gb_02083	ICU4, ATHB15,...	transcription factor (HD-ZIP III)	0.05	OrthoFinder output from all 47 species
Gb_22761	ICU4, ATHB15,...	transcription factor (HD-ZIP III)	0.06	OrthoFinder output from all 47 species
LOC_Os03g43930.1	PHB-1D, ATHB-14,...	transcription factor (HD-ZIP III)	0.05	OrthoFinder output from all 47 species
Lfl_g26487	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_19520g0020	ICU4, ATHB15,...	transcription factor (HD-ZIP III)	0.02	OrthoFinder output from all 47 species
Mp1g24140.1	HB-8, ATHB8, ATHB-8	transcription factor (HD-ZIP III)	0.04	OrthoFinder output from all 47 species
Msp_g02849	ICU4, ATHB15,...	transcriptional co-regulator *(ZPR) & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g19565	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g26446	PHB-1D, ATHB-14,...	transcriptional co-regulator *(ZPR) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g08842	No alias	transcriptional co-regulator *(ZPR) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g08843	No alias	transcriptional co-regulator *(ZPR) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g39110	No alias	HD-ZIP III-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc08g066500.4.1	ICU4, ATHB15,...	transcription factor (HD-ZIP III)	0.08	OrthoFinder output from all 47 species
Zm00001e000073_P001	IFL1, IFL, REV,...	transcription factor (HD-ZIP III)	0.03	OrthoFinder output from all 47 species
Zm00001e004553_P004	IFL1, IFL, REV,...	transcription factor (HD-ZIP III)	0.04	OrthoFinder output from all 47 species
Zm00001e005034_P001	PHB-1D, ATHB-14,...	transcription factor (HD-ZIP III)	0.05	OrthoFinder output from all 47 species
Zm00001e012408_P002	PHB-1D, ATHB-14,...	transcription factor (HD-ZIP III)	0.05	OrthoFinder output from all 47 species
Zm00001e018118_P002	PHB-1D, ATHB-14,...	transcription factor (HD-ZIP III)	0.04	OrthoFinder output from all 47 species
Zm00001e025995_P002	ICU4, ATHB15,...	transcription factor (HD-ZIP III)	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	TAS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006995	cellular response to nitrogen starvation	RCA	Interproscan
BP	GO:0007015	actin filament organization	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0007155	cell adhesion	RCA	Interproscan
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009799	specification of symmetry	None	Extended
BP	GO:0009855	determination of bilateral symmetry	IMP	Interproscan
BP	GO:0009855	determination of bilateral symmetry	RCA	Interproscan
BP	GO:0009887	animal organ morphogenesis	IMP	Interproscan
BP	GO:0009887	animal organ morphogenesis	RCA	Interproscan
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009944	polarity specification of adaxial/abaxial axis	RCA	Interproscan
BP	GO:0009953	dorsal/ventral pattern formation	None	Extended
BP	GO:0009965	leaf morphogenesis	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010014	meristem initiation	IMP	Interproscan
BP	GO:0010014	meristem initiation	RCA	Interproscan
BP	GO:0010016	shoot system morphogenesis	None	Extended
BP	GO:0010051	xylem and phloem pattern formation	RCA	Interproscan
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010073	meristem maintenance	RCA	Interproscan
BP	GO:0010073	meristem maintenance	TAS	Interproscan
BP	GO:0010075	regulation of meristem growth	IMP	Interproscan
BP	GO:0010075	regulation of meristem growth	RCA	Interproscan
BP	GO:0010087	phloem or xylem histogenesis	IMP	Interproscan
BP	GO:0010089	xylem development	RCA	Interproscan
BP	GO:0010090	trichome morphogenesis	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042594	response to starvation	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043562	cellular response to nitrogen levels	None	Extended
BP	GO:0045010	actin nucleation	RCA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048263	determination of dorsal identity	IMP	Interproscan
BP	GO:0048439	flower morphogenesis	RCA	Interproscan
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048519	negative regulation of biological process	RCA	Interproscan
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065001	specification of axis polarity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	RCA	Interproscan
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080060	integument development	IGI	Interproscan
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001763	morphogenesis of a branching structure	IEP	HCCA
MF	GO:0004871	obsolete signal transducer activity	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	HCCA
BP	GO:0006855	xenobiotic transmembrane transport	IEP	HCCA
BP	GO:0010065	primary meristem tissue development	IEP	HCCA
BP	GO:0010067	procambium histogenesis	IEP	HCCA
BP	GO:0010223	secondary shoot formation	IEP	HCCA
BP	GO:0010346	shoot axis formation	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0019321	pentose metabolic process	IEP	HCCA
BP	GO:0042732	D-xylose metabolic process	IEP	HCCA
BP	GO:0042908	xenobiotic transport	IEP	HCCA
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	HCCA
BP	GO:0048507	meristem development	IEP	HCCA
BP	GO:0048508	embryonic meristem development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013978	MEKHLA	693	835
IPR002913	START_lipid-bd_dom	161	369
IPR001356	Homeobox_dom	17	75

External Links

No external refs found!

AT1G52150 (ICU4, ATHB15, ATHB-15, CNA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation