AT1G43700 (SUE3, VIP1)

Aliases : SUE3, VIP1

Description : VIRE2-interacting protein 1

Gene families : OG0000155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000155_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G43700

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00030p00014690	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bZIP...	0.02	OrthoFinder output from all 47 species
Adi_g016089	No alias	bZIP class-L transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g023658	No alias	bZIP class-L transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g096483	No alias	bZIP class-L transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g106789	No alias	bZIP class-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g01459	No alias	bZIP class-L transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene61686.t1	Aspi01Gene61686	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0151.g053367	ATBZIP34, BZIP34	bZIP class-L transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ceric.05G004100.1	Ceric.05G004100	bZIP class-L transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ceric.18G057800.1	Ceric.18G057800	bZIP class-I transcription factor & original...	0.03	OrthoFinder output from all 47 species
Len_g17568	No alias	bZIP class-I transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Lfl_g23128	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g28477	No alias	bZIP class-I transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Ore_g28369	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g09495	No alias	bZIP class-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001113	No alias	bZIP class-I transcription factor & original...	0.04	OrthoFinder output from all 47 species
Solyc04g071160.3.1	SUE3, VIP1,...	transcription factor (bZIP)	0.02	OrthoFinder output from all 47 species
Solyc04g081190.3.1	Solyc04g081190	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species
Zm00001e039435_P001	SUE3, VIP1,...	transcription factor (bZIP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IDA	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	IMP	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008272	sulfate transport	IMP	Interproscan
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009292	horizontal gene transfer	None	Extended
BP	GO:0009294	DNA-mediated transformation	IDA	Interproscan
BP	GO:0009410	response to xenobiotic stimulus	RCA	Interproscan
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009970	cellular response to sulfate starvation	IMP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	None	Extended
MF	GO:0019901	protein kinase binding	None	Extended
BP	GO:0030968	endoplasmic reticulum unfolded protein response	RCA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034976	response to endoplasmic reticulum stress	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042594	response to starvation	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IDA	Interproscan
BP	GO:0045595	regulation of cell differentiation	None	Extended
BP	GO:0045596	negative regulation of cell differentiation	IDA	Interproscan
BP	GO:0045892	negative regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0051019	mitogen-activated protein kinase binding	IPI	Interproscan
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	IDA	Interproscan
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0072348	sulfur compound transport	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006401	RNA catabolic process	IEP	HCCA
BP	GO:0006402	mRNA catabolic process	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
BP	GO:0009314	response to radiation	IEP	HCCA
BP	GO:0009416	response to light stimulus	IEP	HCCA
BP	GO:0009637	response to blue light	IEP	HCCA
BP	GO:0009648	photoperiodism	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0048573	photoperiodism, flowering	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004827	bZIP	196	254

External Links

No external refs found!

AT1G43700 (SUE3, VIP1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation