AT1G30490 (PHV, ATHB9)

Aliases : PHV, ATHB9

Description : Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein

Gene families : OG0000446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000446_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G30490

Target	Alias	Description	ECC score	Gene Family Method
Aev_g36023	PHB-1D, ATHB-14,...	transcriptional co-regulator *(ZPR) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g22007	HB-8, ATHB8, ATHB-8	transcriptional co-regulator *(ZPR) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.17G020900.1	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Lfl_g26487	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g19565	ICU4, ATHB15,...	HD-ZIP III-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g49880	ICU4, ATHB15,...	transcriptional co-regulator *(ZPR) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0007015	actin filament organization	None	Extended
BP	GO:0007155	cell adhesion	RCA	Interproscan
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009798	axis specification	None	Extended
BP	GO:0009799	specification of symmetry	None	Extended
BP	GO:0009855	determination of bilateral symmetry	IMP	Interproscan
BP	GO:0009855	determination of bilateral symmetry	RCA	Interproscan
BP	GO:0009880	embryonic pattern specification	IGI	Interproscan
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009943	adaxial/abaxial axis specification	IMP	Interproscan
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IMP	Interproscan
BP	GO:0009944	polarity specification of adaxial/abaxial axis	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010014	meristem initiation	IMP	Interproscan
BP	GO:0010014	meristem initiation	RCA	Interproscan
BP	GO:0010051	xylem and phloem pattern formation	RCA	Interproscan
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010072	primary shoot apical meristem specification	IMP	Interproscan
BP	GO:0010072	primary shoot apical meristem specification	RCA	Interproscan
BP	GO:0010073	meristem maintenance	RCA	Interproscan
BP	GO:0010075	regulation of meristem growth	RCA	Interproscan
BP	GO:0010090	trichome morphogenesis	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045010	actin nucleation	RCA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065001	specification of axis polarity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	RCA	Interproscan
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080060	integument development	IGI	Interproscan
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090421	embryonic meristem initiation	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004719	protein-L-isoaspartate (D-aspartate) O-methyltransferase activity	IEP	HCCA
BP	GO:0007568	aging	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008171	O-methyltransferase activity	IEP	HCCA
MF	GO:0008276	protein methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0009845	seed germination	IEP	HCCA
MF	GO:0010340	carboxyl-O-methyltransferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0051998	protein carboxyl O-methyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013978	MEKHLA	694	840
IPR002913	START_lipid-bd_dom	170	378
IPR001356	Homeobox_dom	21	79

External Links

No external refs found!

AT1G30490 (PHV, ATHB9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation