AT1G30120 (PDH-E1 BETA)

Aliases : PDH-E1 BETA

Description : pyruvate dehydrogenase E1 beta

Gene families : OG0003592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003592_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G30120
Cluster	HCCA: Cluster_47

Target	Alias	Description	ECC score	Gene Family Method
Als_g07225	No alias	subunit beta of E1 subcomplex of pyruvate dehydrogenase...	0.03	OrthoFinder output from all 47 species
Azfi_s0037.g025923	No alias	subunit beta of E1 subcomplex of pyruvate dehydrogenase...	0.04	OrthoFinder output from all 47 species
Cba_g14291	No alias	subunit beta of E1 subcomplex of pyruvate dehydrogenase...	0.02	OrthoFinder output from all 47 species
Ceric.07G030600.1	Ceric.07G030600	subunit beta of E1 subcomplex of pyruvate dehydrogenase...	0.06	OrthoFinder output from all 47 species
Ceric.07G043500.1	Ceric.07G043500	subunit beta of E1 subcomplex of pyruvate dehydrogenase...	0.1	OrthoFinder output from all 47 species
Cre03.g194200	PDH-E1 BETA	Lipid metabolism.fatty acid synthesis.acetyl-CoA...	0.08	OrthoFinder output from all 47 species
Dde_g06039	No alias	subunit beta of E1 subcomplex of pyruvate dehydrogenase...	0.03	OrthoFinder output from all 47 species
Gb_06066	No alias	subunit beta of E1 pyruvate dehydrogenase component	0.12	OrthoFinder output from all 47 species
LOC_Os03g44300.1	LOC_Os03g44300	subunit beta of E1 pyruvate dehydrogenase component	0.16	OrthoFinder output from all 47 species
LOC_Os12g42230.1	LOC_Os12g42230	subunit beta of E1 pyruvate dehydrogenase component	0.03	OrthoFinder output from all 47 species
Lfl_g12174	No alias	subunit beta of E1 subcomplex of pyruvate dehydrogenase...	0.04	OrthoFinder output from all 47 species
MA_118815g0010	No alias	subunit beta of E1 pyruvate dehydrogenase component	0.07	OrthoFinder output from all 47 species
Mp6g00740.1	No alias	subunit beta of E1 pyruvate dehydrogenase component	0.11	OrthoFinder output from all 47 species
Msp_g06078	No alias	subunit beta of E1 subcomplex of pyruvate dehydrogenase...	0.05	OrthoFinder output from all 47 species
Nbi_g09136	No alias	subunit beta of E1 subcomplex of pyruvate dehydrogenase...	0.02	OrthoFinder output from all 47 species
Ore_g03979	No alias	subunit beta of E1 subcomplex of pyruvate dehydrogenase...	0.06	OrthoFinder output from all 47 species
Pir_g17951	No alias	subunit beta of E1 subcomplex of pyruvate dehydrogenase...	0.02	OrthoFinder output from all 47 species
Pp3c24_19300V3.1	Pp3c24_19300	Transketolase family protein	0.02	OrthoFinder output from all 47 species
Pp3c8_21910V3.1	Pp3c8_21910	Transketolase family protein	0.01	OrthoFinder output from all 47 species
Ppi_g13026	No alias	subunit beta of E1 subcomplex of pyruvate dehydrogenase...	0.03	OrthoFinder output from all 47 species
Ppi_g35914	No alias	subunit beta of E1 subcomplex of pyruvate dehydrogenase...	0.07	OrthoFinder output from all 47 species
Sam_g19073	No alias	subunit beta of E1 subcomplex of pyruvate dehydrogenase...	0.04	OrthoFinder output from all 47 species
Solyc04g008590.3.1	Solyc04g008590	subunit beta of E1 pyruvate dehydrogenase component	0.18	OrthoFinder output from all 47 species
Solyc08g016750.3.1	Solyc08g016750	subunit beta of E1 pyruvate dehydrogenase component	0.12	OrthoFinder output from all 47 species
Zm00001e003250_P002	Zm00001e003250	subunit beta of E1 pyruvate dehydrogenase component	0.19	OrthoFinder output from all 47 species
Zm00001e005013_P001	PDH-E1 BETA,...	subunit beta of E1 pyruvate dehydrogenase component	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004738	pyruvate dehydrogenase activity	None	Extended
MF	GO:0004739	pyruvate dehydrogenase (acetyl-transferring) activity	ISS	Interproscan
MF	GO:0004739	pyruvate dehydrogenase (acetyl-transferring) activity	TAS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006084	acetyl-CoA metabolic process	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006575	cellular modified amino acid metabolic process	None	Extended
BP	GO:0006576	biogenic amine metabolic process	None	Extended
BP	GO:0006595	polyamine metabolic process	None	Extended
BP	GO:0006598	polyamine catabolic process	RCA	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	TAS	Interproscan
BP	GO:0006637	acyl-CoA metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009308	amine metabolic process	None	Extended
BP	GO:0009310	amine catabolic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009507	chloroplast	TAS	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009611	response to wounding	RCA	Interproscan
BP	GO:0009698	phenylpropanoid metabolic process	RCA	Interproscan
BP	GO:0009699	phenylpropanoid biosynthetic process	None	Extended
BP	GO:0009804	coumarin metabolic process	None	Extended
BP	GO:0009805	coumarin biosynthetic process	RCA	Interproscan
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0010240	plastid pyruvate dehydrogenase complex	TAS	Interproscan
BP	GO:0010817	regulation of hormone levels	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016125	sterol metabolic process	None	Extended
BP	GO:0016126	sterol biosynthetic process	RCA	Interproscan
BP	GO:0016128	phytosteroid metabolic process	None	Extended
BP	GO:0016129	phytosteroid biosynthetic process	None	Extended
BP	GO:0016131	brassinosteroid metabolic process	None	Extended
BP	GO:0016132	brassinosteroid biosynthetic process	RCA	Interproscan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	None	Extended
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033865	nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0033875	ribonucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034032	purine nucleoside bisphosphate metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035383	thioester metabolic process	None	Extended
BP	GO:0042398	cellular modified amino acid biosynthetic process	RCA	Interproscan
BP	GO:0042402	cellular biogenic amine catabolic process	None	Extended
BP	GO:0042445	hormone metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
CC	GO:0045254	pyruvate dehydrogenase complex	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000036	acyl carrier activity	IEP	HCCA
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	HCCA
BP	GO:0000096	sulfur amino acid metabolic process	IEP	HCCA
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
BP	GO:0001676	long-chain fatty acid metabolic process	IEP	HCCA
MF	GO:0003989	acetyl-CoA carboxylase activity	IEP	HCCA
MF	GO:0004075	biotin carboxylase activity	IEP	HCCA
MF	GO:0004076	biotin synthase activity	IEP	HCCA
MF	GO:0004148	dihydrolipoyl dehydrogenase activity	IEP	HCCA
MF	GO:0004312	fatty acid synthase activity	IEP	HCCA
MF	GO:0004315	3-oxoacyl-[acyl-carrier-protein] synthase activity	IEP	HCCA
MF	GO:0004316	3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity	IEP	HCCA
MF	GO:0004318	enoyl-[acyl-carrier-protein] reductase (NADH) activity	IEP	HCCA
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	IEP	HCCA
MF	GO:0004742	dihydrolipoyllysine-residue acetyltransferase activity	IEP	HCCA
MF	GO:0005504	fatty acid binding	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
CC	GO:0005835	fatty acid synthase complex	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006081	cellular aldehyde metabolic process	IEP	HCCA
BP	GO:0006085	acetyl-CoA biosynthetic process	IEP	HCCA
BP	GO:0006086	acetyl-CoA biosynthetic process from pyruvate	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006544	glycine metabolic process	IEP	HCCA
BP	GO:0006546	glycine catabolic process	IEP	HCCA
BP	GO:0006636	unsaturated fatty acid biosynthetic process	IEP	HCCA
BP	GO:0006733	obsolete oxidoreduction coenzyme metabolic process	IEP	HCCA
BP	GO:0006743	ubiquinone metabolic process	IEP	HCCA
BP	GO:0006744	ubiquinone biosynthetic process	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006768	biotin metabolic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007020	microtubule nucleation	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
BP	GO:0008652	amino acid biosynthetic process	IEP	HCCA
MF	GO:0008710	8-amino-7-oxononanoate synthase activity	IEP	HCCA
BP	GO:0009063	amino acid catabolic process	IEP	HCCA
BP	GO:0009069	serine family amino acid metabolic process	IEP	HCCA
BP	GO:0009071	serine family amino acid catabolic process	IEP	HCCA
BP	GO:0009072	aromatic amino acid metabolic process	IEP	HCCA
BP	GO:0009102	biotin biosynthetic process	IEP	HCCA
BP	GO:0009106	lipoate metabolic process	IEP	HCCA
BP	GO:0009107	lipoate biosynthetic process	IEP	HCCA
BP	GO:0009108	obsolete coenzyme biosynthetic process	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009266	response to temperature stimulus	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
CC	GO:0009528	plastid inner membrane	IEP	HCCA
CC	GO:0009534	chloroplast thylakoid	IEP	HCCA
CC	GO:0009579	thylakoid	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0009631	cold acclimation	IEP	HCCA
BP	GO:0009694	jasmonic acid metabolic process	IEP	HCCA
BP	GO:0009695	jasmonic acid biosynthetic process	IEP	HCCA
CC	GO:0009706	chloroplast inner membrane	IEP	HCCA
BP	GO:0010020	chloroplast fission	IEP	HCCA
MF	GO:0015645	fatty acid ligase activity	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0016405	CoA-ligase activity	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016417	S-acyltransferase activity	IEP	HCCA
MF	GO:0016418	S-acetyltransferase activity	IEP	HCCA
MF	GO:0016421	CoA carboxylase activity	IEP	HCCA
MF	GO:0016628	oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016631	enoyl-[acyl-carrier-protein] reductase activity	IEP	HCCA
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	IEP	HCCA
MF	GO:0016668	oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	IEP	HCCA
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	HCCA
MF	GO:0016783	sulfurtransferase activity	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	HCCA
MF	GO:0016878	acid-thiol ligase activity	IEP	HCCA
MF	GO:0016885	ligase activity, forming carbon-carbon bonds	IEP	HCCA
MF	GO:0016992	lipoate synthase activity	IEP	HCCA
MF	GO:0019171	3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	IEP	HCCA
BP	GO:0019216	regulation of lipid metabolic process	IEP	HCCA
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	HCCA
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	HCCA
CC	GO:0022626	cytosolic ribosome	IEP	HCCA
MF	GO:0031406	carboxylic acid binding	IEP	HCCA
BP	GO:0031407	oxylipin metabolic process	IEP	HCCA
BP	GO:0031408	oxylipin biosynthetic process	IEP	HCCA
CC	GO:0031976	plastid thylakoid	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
MF	GO:0033293	monocarboxylic acid binding	IEP	HCCA
BP	GO:0033559	unsaturated fatty acid metabolic process	IEP	HCCA
BP	GO:0033866	nucleoside bisphosphate biosynthetic process	IEP	HCCA
BP	GO:0034030	ribonucleoside bisphosphate biosynthetic process	IEP	HCCA
BP	GO:0034033	purine nucleoside bisphosphate biosynthetic process	IEP	HCCA
BP	GO:0035384	thioester biosynthetic process	IEP	HCCA
BP	GO:0042180	cellular ketone metabolic process	IEP	HCCA
BP	GO:0042181	ketone biosynthetic process	IEP	HCCA
BP	GO:0042335	cuticle development	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	HCCA
BP	GO:0042744	hydrogen peroxide catabolic process	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043572	plastid fission	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
MF	GO:0044620	ACP phosphopantetheine attachment site binding	IEP	HCCA
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
MF	GO:0051192	prosthetic group binding	IEP	HCCA
BP	GO:0071616	acyl-CoA biosynthetic process	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
MF	GO:0140104	molecular carrier activity	IEP	HCCA
MF	GO:0140414	phosphopantetheine-dependent carrier activity	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901605	alpha-amino acid metabolic process	IEP	HCCA
BP	GO:1901606	alpha-amino acid catabolic process	IEP	HCCA
BP	GO:1901661	quinone metabolic process	IEP	HCCA
BP	GO:1901663	quinone biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005475	Transketolase-like_Pyr-bd	90	260
IPR033248	Transketolase_C	276	397

External Links

No external refs found!

AT1G30120 (PDH-E1 BETA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation