AT1G28190

Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12340.1); Has 166 Blast hits to 162 proteins in 36 species: Archae - 0; Bacteria - 2; Metazoa - 15; Fungi - 5; Plants - 124; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).

Gene families : OG0005743 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005743_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G28190
Cluster	HCCA: Cluster_62

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00245800	evm_27.TU.AmTr_v1...	No description available	0.08	OrthoFinder output from all 47 species
AMTR_s00063p00151320	evm_27.TU.AmTr_v1...	No description available	0.02	OrthoFinder output from all 47 species
AT5G12340	No alias	unknown protein; BEST Arabidopsis thaliana protein match...	0.06	OrthoFinder output from all 47 species
Ehy_g06291	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01037265001	No alias	No description available	0.05	OrthoFinder output from all 47 species
Gb_10892	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Gb_11824	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Gb_26414	No alias	no hits & (original description: none)	0.09	OrthoFinder output from all 47 species
LOC_Os01g72360.1	LOC_Os01g72360	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
LOC_Os03g24100.1	LOC_Os03g24100	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os05g31970.1	LOC_Os05g31970	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os07g46510.1	LOC_Os07g46510	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os11g33050.1	LOC_Os11g33050	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_10381881g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_118095g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_134509g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_168522g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_218732g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_223132g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_311429g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_39044g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_5824616g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_600517g0010	No alias	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
MA_74636g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_88642g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc04g057830.1.1	Solyc04g057830	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
Zm00001e011175_P001	Zm00001e011175	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Zm00001e018591_P001	Zm00001e018591	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Zm00001e024210_P001	Zm00001e024210	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Zm00001e031559_P001	Zm00001e031559	no hits & (original description: none)	0.09	OrthoFinder output from all 47 species
Zm00001e038180_P001	Zm00001e038180	no hits & (original description: none)	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	RCA	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009738	abscisic acid-activated signaling pathway	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009863	salicylic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009867	jasmonic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0035556	intracellular signal transduction	RCA	Interproscan
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	HCCA
BP	GO:0002252	immune effector process	IEP	HCCA
BP	GO:0002376	immune system process	IEP	HCCA
BP	GO:0002679	respiratory burst involved in defense response	IEP	HCCA
MF	GO:0004364	glutathione transferase activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006520	amino acid metabolic process	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
BP	GO:0006972	hyperosmotic response	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
BP	GO:0008361	regulation of cell size	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009072	aromatic amino acid metabolic process	IEP	HCCA
BP	GO:0009404	toxin metabolic process	IEP	HCCA
BP	GO:0009407	toxin catabolic process	IEP	HCCA
BP	GO:0009414	response to water deprivation	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009607	response to biotic stimulus	IEP	HCCA
BP	GO:0009608	response to symbiont	IEP	HCCA
BP	GO:0009610	response to symbiotic fungus	IEP	HCCA
BP	GO:0009611	response to wounding	IEP	HCCA
BP	GO:0009620	response to fungus	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0009651	response to salt stress	IEP	HCCA
BP	GO:0009692	ethylene metabolic process	IEP	HCCA
BP	GO:0009693	ethylene biosynthetic process	IEP	HCCA
BP	GO:0009743	response to carbohydrate	IEP	HCCA
BP	GO:0009753	response to jasmonic acid	IEP	HCCA
MF	GO:0009975	cyclase activity	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010038	response to metal ion	IEP	HCCA
BP	GO:0010193	response to ozone	IEP	HCCA
BP	GO:0010200	response to chitin	IEP	HCCA
BP	GO:0010243	response to organonitrogen compound	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
BP	GO:0019748	secondary metabolic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0019900	kinase binding	IEP	HCCA
MF	GO:0019901	protein kinase binding	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0033037	polysaccharide localization	IEP	HCCA
MF	GO:0033218	amide binding	IEP	HCCA
BP	GO:0033993	response to lipid	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
MF	GO:0042277	peptide binding	IEP	HCCA
BP	GO:0042537	benzene-containing compound metabolic process	IEP	HCCA
BP	GO:0042538	hyperosmotic salinity response	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0043207	response to external biotic stimulus	IEP	HCCA
MF	GO:0043295	glutathione binding	IEP	HCCA
MF	GO:0043424	protein histidine kinase binding	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0043449	cellular alkene metabolic process	IEP	HCCA
BP	GO:0043450	alkene biosynthetic process	IEP	HCCA
BP	GO:0043455	regulation of secondary metabolic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	HCCA
BP	GO:0045730	respiratory burst	IEP	HCCA
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	HCCA
MF	GO:0046423	allene-oxide cyclase activity	IEP	HCCA
BP	GO:0046482	para-aminobenzoic acid metabolic process	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
BP	GO:0046686	response to cadmium ion	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0047893	flavonol 3-O-glucosyltransferase activity	IEP	HCCA
BP	GO:0048585	negative regulation of response to stimulus	IEP	HCCA
BP	GO:0051552	flavone metabolic process	IEP	HCCA
BP	GO:0051553	flavone biosynthetic process	IEP	HCCA
BP	GO:0051554	flavonol metabolic process	IEP	HCCA
BP	GO:0051555	flavonol biosynthetic process	IEP	HCCA
BP	GO:0051707	response to other organism	IEP	HCCA
BP	GO:0052542	defense response by callose deposition	IEP	HCCA
BP	GO:0052545	callose localization	IEP	HCCA
BP	GO:0070542	response to fatty acid	IEP	HCCA
MF	GO:0072341	modified amino acid binding	IEP	HCCA
BP	GO:0080036	regulation of cytokinin-activated signaling pathway	IEP	HCCA
BP	GO:0080037	negative regulation of cytokinin-activated signaling pathway	IEP	HCCA
MF	GO:0080043	quercetin 3-O-glucosyltransferase activity	IEP	HCCA
MF	GO:0080044	quercetin 7-O-glucosyltransferase activity	IEP	HCCA
BP	GO:0098542	defense response to other organism	IEP	HCCA
BP	GO:0098754	detoxification	IEP	HCCA
BP	GO:0120251	hydrocarbon biosynthetic process	IEP	HCCA
BP	GO:0120252	hydrocarbon metabolic process	IEP	HCCA
BP	GO:0120254	olefinic compound metabolic process	IEP	HCCA
BP	GO:0120255	olefinic compound biosynthetic process	IEP	HCCA
BP	GO:1900673	olefin metabolic process	IEP	HCCA
BP	GO:1900674	olefin biosynthetic process	IEP	HCCA
MF	GO:1900750	oligopeptide binding	IEP	HCCA
MF	GO:1901681	sulfur compound binding	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2000762	regulation of phenylpropanoid metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025322	PADRE_dom	38	213

External Links

No external refs found!

AT1G28190

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation