Aliases : INO
Description : Plant-specific transcription factor YABBY family protein
Gene families : OG0002690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002690_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT1G23420 | |
Cluster | HCCA: Cluster_16 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00047p00199030 | CRC,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.08 | OrthoFinder output from all 47 species | |
AMTR_s00085p00032940 | AFO, YAB1, FIL,... | RNA biosynthesis.transcriptional activation.C2C2... | 0.07 | OrthoFinder output from all 47 species | |
AT2G45190 | AFO, YAB1, FIL | Plant-specific transcription factor YABBY family protein | 0.06 | OrthoFinder output from all 47 species | |
AT4G00180 | YAB3 | Plant-specific transcription factor YABBY family protein | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01012246001 | CRC | RNA biosynthesis.transcriptional activation.C2C2... | 0.11 | OrthoFinder output from all 47 species | |
GSVIVT01015567001 | YAB5 | RNA biosynthesis.transcriptional activation.C2C2... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01022586001 | YAB2 | RNA biosynthesis.transcriptional activation.C2C2... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01037533001 | YAB2 | RNA biosynthesis.transcriptional activation.C2C2... | 0.04 | OrthoFinder output from all 47 species | |
Gb_22423 | YAB5 | transcription factor (YABBY) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os02g42950.1 | AFO, YAB1, FIL,... | transcription factor (YABBY) | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os04g45330.1 | AFO, YAB1, FIL,... | transcription factor (YABBY) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os07g06620.2 | YAB2, LOC_Os07g06620 | transcription factor (YABBY) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g36420.1 | AFO, YAB1, FIL,... | transcription factor (YABBY) | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os12g42610.1 | YAB5, LOC_Os12g42610 | transcription factor (YABBY) | 0.05 | OrthoFinder output from all 47 species | |
MA_10432332g0010 | YAB5 | transcription factor (YABBY) | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g010240.3.1 | CRC, Solyc01g010240 | transcription factor (YABBY) | 0.09 | OrthoFinder output from all 47 species | |
Solyc01g091010.3.1 | AFO, YAB1, FIL,... | transcription factor (YABBY) | 0.07 | OrthoFinder output from all 47 species | |
Solyc05g005240.2.1 | INO, Solyc05g005240 | transcription factor (YABBY) | 0.05 | OrthoFinder output from all 47 species | |
Solyc06g073920.3.1 | YAB2, Solyc06g073920 | transcription factor (YABBY) | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g079100.3.1 | AFO, YAB1, FIL,... | transcription factor (YABBY) | 0.05 | OrthoFinder output from all 47 species | |
Solyc11g071810.2.1 | YAB2, Solyc11g071810 | transcription factor (YABBY) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e000845_P005 | CRC, Zm00001e000845 | transcription factor (YABBY) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e003268_P003 | AFO, YAB1, FIL,... | transcription factor (YABBY) | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e004396_P001 | AFO, YAB1, FIL,... | transcription factor (YABBY) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e007412_P003 | AFO, YAB1, FIL,... | transcription factor (YABBY) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e012387_P001 | YAB5, Zm00001e012387 | transcription factor (YABBY) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e012388_P001 | YAB5, Zm00001e012388 | transcription factor (YABBY) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e012577_P001 | AFO, YAB1, FIL,... | transcription factor (YABBY) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e017951_P002 | YAB5, Zm00001e017951 | transcription factor (YABBY) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e032845_P002 | YAB2, Zm00001e032845 | transcription factor (YABBY) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e038717_P002 | CRC, Zm00001e038717 | transcription factor (YABBY) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e041322_P001 | AFO, YAB1, FIL,... | transcription factor (YABBY) | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | ISS | Interproscan |
MF | GO:0005515 | protein binding | IPI | Interproscan |
CC | GO:0005634 | nucleus | IDA | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0009944 | polarity specification of adaxial/abaxial axis | IDA | Interproscan |
BP | GO:0048481 | plant ovule development | IMP | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0003002 | regionalization | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
BP | GO:0006308 | DNA catabolic process | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0009553 | embryo sac development | IEP | HCCA |
BP | GO:0009566 | fertilization | IEP | HCCA |
BP | GO:0009567 | double fertilization forming a zygote and endosperm | IEP | HCCA |
BP | GO:0009608 | response to symbiont | IEP | HCCA |
BP | GO:0009610 | response to symbiotic fungus | IEP | HCCA |
BP | GO:0009653 | anatomical structure morphogenesis | IEP | HCCA |
BP | GO:0009886 | post-embryonic animal morphogenesis | IEP | HCCA |
BP | GO:0009888 | tissue development | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009900 | dehiscence | IEP | HCCA |
BP | GO:0009908 | flower development | IEP | HCCA |
BP | GO:0010047 | fruit dehiscence | IEP | HCCA |
BP | GO:0010093 | specification of floral organ identity | IEP | HCCA |
BP | GO:0010160 | formation of animal organ boundary | IEP | HCCA |
CC | GO:0010169 | thioglucosidase complex | IEP | HCCA |
MF | GO:0010180 | thioglucosidase binding | IEP | HCCA |
BP | GO:0010430 | fatty acid omega-oxidation | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010500 | transmitting tissue development | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
BP | GO:0031537 | regulation of anthocyanin metabolic process | IEP | HCCA |
BP | GO:0031540 | regulation of anthocyanin biosynthetic process | IEP | HCCA |
BP | GO:0044403 | biological process involved in symbiotic interaction | IEP | HCCA |
MF | GO:0046593 | mandelonitrile lyase activity | IEP | HCCA |
BP | GO:0048229 | gametophyte development | IEP | HCCA |
BP | GO:0048367 | shoot system development | IEP | HCCA |
BP | GO:0048437 | floral organ development | IEP | HCCA |
BP | GO:0048438 | floral whorl development | IEP | HCCA |
BP | GO:0048440 | carpel development | IEP | HCCA |
BP | GO:0048441 | petal development | IEP | HCCA |
BP | GO:0048443 | stamen development | IEP | HCCA |
BP | GO:0048446 | petal morphogenesis | IEP | HCCA |
BP | GO:0048462 | carpel formation | IEP | HCCA |
BP | GO:0048467 | gynoecium development | IEP | HCCA |
BP | GO:0048507 | meristem development | IEP | HCCA |
BP | GO:0048608 | reproductive structure development | IEP | HCCA |
BP | GO:0048609 | multicellular organismal reproductive process | IEP | HCCA |
BP | GO:0048646 | anatomical structure formation involved in morphogenesis | IEP | HCCA |
BP | GO:0048731 | system development | IEP | HCCA |
BP | GO:0048827 | phyllome development | IEP | HCCA |
BP | GO:0048859 | formation of anatomical boundary | IEP | HCCA |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
BP | GO:0050789 | regulation of biological process | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0065007 | biological regulation | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
BP | GO:0090567 | reproductive shoot system development | IEP | HCCA |
BP | GO:0090698 | post-embryonic plant morphogenesis | IEP | HCCA |
BP | GO:0090701 | specification of plant organ identity | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006780 | YABBY | 18 | 181 |
No external refs found! |