1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G19940

AT1G19940 (AtGH9B5, GH9B5)


Aliases : AtGH9B5, GH9B5

Description : glycosyl hydrolase 9B5


Gene families : OG0000240 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000240_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G19940

Target Alias Description ECC score Gene Family Method Actions
AT1G22880 CEL5, ATGH9B4, ATCEL5 cellulase 5 0.04 OrthoFinder output from all 47 species
AT1G48930 AtGH9C1, GH9C1 glycosyl hydrolase 9C1 0.02 OrthoFinder output from all 47 species
AT1G64390 GH9C2, AtGH9C2 glycosyl hydrolase 9C2 0.03 OrthoFinder output from all 47 species
AT2G32990 AtGH9B8, GH9B8 glycosyl hydrolase 9B8 0.02 OrthoFinder output from all 47 species
AT4G23560 GH9B15, AtGH9B15 glycosyl hydrolase 9B15 0.05 OrthoFinder output from all 47 species
Adi_g081294 AtGH9B7, GH9B7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00949 AtGH9B5, GH9B5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10239 GH9C2, AtGH9C2 class-C endo-1,4-beta-glucanase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23390.t1 AtGH9A4, GH9A4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69642.t1 GH9B14,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007923 AtGH9B8, GH9B8 not classified & original description: CDS=1-1518 0.04 OrthoFinder output from all 47 species
LOC_Os02g03120.1 ATCEL2, CEL2,... Endoglucanase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os09g23084.1 AtGH9B8, GH9B8,... Endoglucanase 22 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
LOC_Os09g36060.1 GH9B18,... Endoglucanase 23 OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species
LOC_Os09g36350.1 AtGH9B7, GH9B7,... Endoglucanase 24 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Len_g06926 AtGH9B8, GH9B8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430521g0010 AtGH9A4, GH9A4 Endoglucanase 16 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_107238g0010 AtGH9B13, GH9B13 Endoglucanase 4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_128094g0010 ATCEL2, CEL2 Endoglucanase 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_132273g0020 AtGH9B7, GH9B7 Endoglucanase 10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_182379g0010 AtGH9B6, GH9B6 Endoglucanase 8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_216572g0010 ATCEL2, CEL2 Endoglucanase 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp8g17860.1 ATCEL2, CEL2 Endoglucanase 3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Nbi_g02145 AtGH9B13, GH9B13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0101.g019803 AtGH9A4, GH9A4 not classified & original description: CDS=1-363 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0175.g024541 AtGH9C3, GH9C3 class-C endo-1,4-beta-glucanase & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g10198 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g055980.1.1 GH9C2, AtGH9C2,... Endoglucanase 6 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Zm00001e013509_P001 ATCEL2, CEL2,... Endoglucanase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e026066_P002 AtGH9C3, GH9C3,... Endoglucanase 2 OS=Oryza sativa subsp. japonica... 0.09 OrthoFinder output from all 47 species
Zm00001e027175_P002 GH9C2, AtGH9C2,... Endoglucanase 15 OS=Oryza sativa subsp. japonica... 0.06 OrthoFinder output from all 47 species
Zm00001e029192_P001 ATCEL2, CEL2,... Endoglucanase 19 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Zm00001e034821_P002 AtGH9B7, GH9B7,... Endoglucanase 24 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 49 502
No external refs found!