AT1G13230

Description : Leucine-rich repeat (LRR) family protein

Gene families : OG0001645 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001645_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G13230
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00257820	RIC7,...	Phytohormones.signalling peptides.CRP...	0.07	OrthoFinder output from all 47 species
AMTR_s00067p00100740	evm_27.TU.AmTr_v1...	Piriformospora indica-insensitive protein 2...	0.04	OrthoFinder output from all 47 species
AMTR_s00162p00041240	RLP29, AtRLP29,...	Phytohormones.signalling peptides.CRP...	0.06	OrthoFinder output from all 47 species
AT3G25670	No alias	Leucine-rich repeat (LRR) family protein	0.06	OrthoFinder output from all 47 species
Aev_g18995	No alias	EPF-peptide co-receptor *(TMM) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g20539	RLP29, AtRLP29	EPF-peptide co-receptor *(TMM) & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g16403	RLP29, AtRLP29	EPF-peptide co-receptor *(TMM) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g23489	No alias	EPF-peptide co-receptor *(TMM) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g01011	No alias	EPF-peptide co-receptor *(TMM) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g05616	RLP29, AtRLP29	EPF-peptide co-receptor *(TMM) & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g00592	RLP29, AtRLP29	EPF-peptide co-receptor *(TMM) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g07146	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene10250.t1	Aspi01Gene10250	EPF-peptide co-receptor *(TMM) & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene24028.t1	RIC7, Aspi01Gene24028	EPF-peptide co-receptor *(TMM) & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene45717.t1	RLP29, AtRLP29,...	EPF-peptide co-receptor *(TMM) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0034.g025440	RLP29, AtRLP29	EPF-peptide co-receptor *(TMM) & original description: CDS=1-1392	0.04	OrthoFinder output from all 47 species
Ceric.02G105900.1	RLP29, AtRLP29,...	EPF-peptide co-receptor *(TMM) & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.21G076400.1	RLP29, AtRLP29,...	EPF-peptide co-receptor *(TMM) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.27G029700.1	Ceric.27G029700	not classified & original description: pacid=50605924...	0.04	OrthoFinder output from all 47 species
Dac_g10843	No alias	EPF-peptide co-receptor *(TMM) & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g34935	RLP29, AtRLP29	EPF-peptide co-receptor *(TMM) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g01642	No alias	EPF-peptide co-receptor *(TMM) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g07456	No alias	EPF-peptide co-receptor *(TMM) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g25022	RLP29, AtRLP29	EPF-peptide co-receptor *(TMM) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g27767	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g06872	RLP29, AtRLP29	EPF-peptide co-receptor *(TMM) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g07679	RLP29, AtRLP29	EPF-peptide co-receptor *(TMM) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g18503	No alias	EPF-peptide co-receptor *(TMM) & original description: none	0.07	OrthoFinder output from all 47 species
GSVIVT01011974001	No alias	Piriformospora indica-insensitive protein 2...	0.04	OrthoFinder output from all 47 species
Gb_16004	No alias	EPF-peptide receptor (TMM)	0.05	OrthoFinder output from all 47 species
LOC_Os01g52880.1	RLP29, AtRLP29,...	Receptor like protein 29 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
LOC_Os05g45430.1	RLP29, AtRLP29,...	Receptor like protein 29 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Len_g09468	No alias	EPF-peptide co-receptor *(TMM) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g11862	RLP29, AtRLP29	EPF-peptide co-receptor *(TMM) & original description: none	0.03	OrthoFinder output from all 47 species
MA_128981g0010	No alias	Piriformospora indica-insensitive protein 2...	0.03	OrthoFinder output from all 47 species
Mp4g00970.1	No alias	EPF-peptide receptor (TMM)	0.05	OrthoFinder output from all 47 species
Msp_g06755	RLP29, AtRLP29	EPF-peptide co-receptor *(TMM) & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g16053	RLP29, AtRLP29	EPF-peptide co-receptor *(TMM) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g06723	No alias	EPF-peptide co-receptor *(TMM) & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g28173	RLP29, AtRLP29	EPF-peptide co-receptor *(TMM) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g33236	RLP29, AtRLP29	EPF-peptide co-receptor *(TMM) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g60051	No alias	EPF-peptide co-receptor *(TMM) & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003114	RLP29, AtRLP29	EPF-peptide co-receptor *(TMM) & original description: CDS=1-1371	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005652	No alias	EPF-peptide co-receptor *(TMM) & original description: CDS=1-1482	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020320	No alias	EPF-peptide co-receptor *(TMM) & original description: CDS=1-1380	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0112.g020763	RIC7	EPF-peptide co-receptor *(TMM) & original description: CDS=1-1410	0.05	OrthoFinder output from all 47 species
Smo126823	RLP29, AtRLP29	Phytohormones.signalling peptides.CRP...	0.08	OrthoFinder output from all 47 species
Smo233841	RLP29, AtRLP29	Phytohormones.signalling peptides.CRP...	0.05	OrthoFinder output from all 47 species
Smo33330	RIC7	Phytohormones.signalling peptides.CRP...	0.05	OrthoFinder output from all 47 species
Smo64019	RLP29, AtRLP29	Phytohormones.signalling peptides.CRP...	0.03	OrthoFinder output from all 47 species
Smo98845	AtRLP43, RLP43	Piriformospora indica-insensitive protein 2...	0.02	OrthoFinder output from all 47 species
Solyc09g072630.3.1	RIC7, Solyc09g072630	Piriformospora indica-insensitive protein 2...	0.05	OrthoFinder output from all 47 species
Tin_g12095	RLP29, AtRLP29	EPF-peptide co-receptor *(TMM) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e017118_P002	Zm00001e017118	Piriformospora indica-insensitive protein 2...	0.02	OrthoFinder output from all 47 species
Zm00001e027467_P001	RLP29, AtRLP29,...	Receptor like protein 29 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e028221_P001	RLP29, AtRLP29,...	Receptor like protein 29 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e032169_P001	RLP29, AtRLP29,...	Receptor like protein 29 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0002237	response to molecule of bacterial origin	RCA	Interproscan
BP	GO:0003006	developmental process involved in reproduction	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0007165	signal transduction	RCA	Interproscan
BP	GO:0007165	signal transduction	IC	Interproscan
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009608	response to symbiont	None	Extended
BP	GO:0009610	response to symbiotic fungus	IMP	Interproscan
BP	GO:0009620	response to fungus	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010103	stomatal complex morphogenesis	RCA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044403	biological process involved in symbiotic interaction	IMP	Interproscan
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0048437	floral organ development	None	Extended
BP	GO:0048443	stamen development	RCA	Interproscan
BP	GO:0048827	phyllome development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0090626	plant epidermis morphogenesis	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001708	cell fate specification	IEP	HCCA
BP	GO:0003002	regionalization	IEP	HCCA
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0006308	DNA catabolic process	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006473	protein acetylation	IEP	HCCA
BP	GO:0006855	xenobiotic transmembrane transport	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
BP	GO:0008356	asymmetric cell division	IEP	HCCA
BP	GO:0008360	regulation of cell shape	IEP	HCCA
MF	GO:0008810	cellulase activity	IEP	HCCA
BP	GO:0009553	embryo sac development	IEP	HCCA
BP	GO:0009566	fertilization	IEP	HCCA
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
BP	GO:0009791	post-embryonic development	IEP	HCCA
BP	GO:0009827	plant-type cell wall modification	IEP	HCCA
BP	GO:0009860	pollen tube growth	IEP	HCCA
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0009908	flower development	IEP	HCCA
BP	GO:0009913	epidermal cell differentiation	IEP	HCCA
BP	GO:0009932	cell tip growth	IEP	HCCA
BP	GO:0010048	vernalization response	IEP	HCCA
BP	GO:0010093	specification of floral organ identity	IEP	HCCA
BP	GO:0010160	formation of animal organ boundary	IEP	HCCA
CC	GO:0010169	thioglucosidase complex	IEP	HCCA
MF	GO:0010180	thioglucosidase binding	IEP	HCCA
BP	GO:0010430	fatty acid omega-oxidation	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0019395	fatty acid oxidation	IEP	HCCA
BP	GO:0030258	lipid modification	IEP	HCCA
BP	GO:0030855	epithelial cell differentiation	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0034440	lipid oxidation	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0042908	xenobiotic transport	IEP	HCCA
BP	GO:0043455	regulation of secondary metabolic process	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0046593	mandelonitrile lyase activity	IEP	HCCA
BP	GO:0048229	gametophyte development	IEP	HCCA
BP	GO:0048367	shoot system development	IEP	HCCA
BP	GO:0048440	carpel development	IEP	HCCA
BP	GO:0048441	petal development	IEP	HCCA
BP	GO:0048446	petal morphogenesis	IEP	HCCA
BP	GO:0048481	plant ovule development	IEP	HCCA
BP	GO:0048507	meristem development	IEP	HCCA
BP	GO:0048608	reproductive structure development	IEP	HCCA
BP	GO:0048731	system development	IEP	HCCA
BP	GO:0048859	formation of anatomical boundary	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
BP	GO:0080051	cutin transport	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:0080154	regulation of fertilization	IEP	HCCA
BP	GO:0080155	regulation of double fertilization forming a zygote and endosperm	IEP	HCCA
BP	GO:0080172	petal epidermis patterning	IEP	HCCA
BP	GO:0090567	reproductive shoot system development	IEP	HCCA
BP	GO:0090701	specification of plant organ identity	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1900376	regulation of secondary metabolite biosynthetic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:1905392	plant organ morphogenesis	IEP	HCCA
BP	GO:2000029	regulation of proanthocyanidin biosynthetic process	IEP	HCCA
BP	GO:2000762	regulation of phenylpropanoid metabolic process	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	192	251

External Links

No external refs found!

AT1G13230

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation