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  5. AT1G11250

AT1G11250 (SYP125, ATSYP125)


Aliases : SYP125, ATSYP125

Description : syntaxin of plants 125


Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G11250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00241620 SYP132,... Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
AT3G03800 ATSYP131, SYP131 syntaxin of plants 131 0.04 OrthoFinder output from all 47 species
AT4G03330 SYP123, ATSYP123 syntaxin of plants 123 0.06 OrthoFinder output from all 47 species
Adi_g006737 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ala_g08621 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Als_g04211 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Als_g36578 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aob_g01068 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aop_g07416 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Aop_g20584 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Aspi01Gene03950.t1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.04 OrthoFinder output from all 47 species
Azfi_s0059.g034575 SYP132, ATSYP132 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Azfi_s0220.g058684 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.06 OrthoFinder output from all 47 species
Ceric.17G026900.1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ceric.22G024200.1 ATSYP124,... Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Dcu_g19765 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Ehy_g01238 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
GSVIVT01006716001 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.05 OrthoFinder output from all 47 species
GSVIVT01030578001 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.07 OrthoFinder output from all 47 species
GSVIVT01030607001 SYP132, ATSYP132 Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
Gb_12333 SYP123, ATSYP123 SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
LOC_Os02g11890.1 ATSYP124,... SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species
LOC_Os03g57310.1 SYP121,... SYP1-group Qa-type SNARE component 0.05 OrthoFinder output from all 47 species
LOC_Os06g39050.1 ATSYP124,... SYP1-group Qa-type SNARE component 0.12 OrthoFinder output from all 47 species
LOC_Os07g07000.1 SYP132,... SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
Lfl_g03028 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Ore_g09931 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Pnu_g33662 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004207 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Sam_g11700 No alias Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Smo74098 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
Smo93442 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.04 OrthoFinder output from all 47 species
Solyc01g006950.3.1 SYP121,... SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
Solyc07g052470.3.1 SYP132,... SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
Solyc12g005580.2.1 ATSYP124,... SYP1-group Qa-type SNARE component 0.1 OrthoFinder output from all 47 species
Spa_g04676 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.05 OrthoFinder output from all 47 species
Spa_g26251 ATSYP131, SYP131 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Spa_g48299 ATSYP131, SYP131 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Tin_g28381 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Tin_g31514 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Zm00001e005922_P001 SYP121,... SYP1-group Qa-type SNARE component 0.04 OrthoFinder output from all 47 species
Zm00001e011479_P001 SYP132,... SYP1-group Qa-type SNARE component 0.03 OrthoFinder output from all 47 species
Zm00001e030621_P001 ATSYP124,... SYP1-group Qa-type SNARE component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005484 SNAP receptor activity TAS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0006886 intracellular protein transport TAS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0002238 response to molecule of fungal origin IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0004683 calmodulin-dependent protein kinase activity IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010208 pollen wall assembly IEP HCCA
BP GO:0010584 pollen exine formation IEP HCCA
BP GO:0010927 cellular component assembly involved in morphogenesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0030029 actin filament-based process IEP HCCA
BP GO:0030048 actin filament-based movement IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 28 233
IPR000727 T_SNARE_dom 235 286
No external refs found!