Aliases : SDG30, ATX2
Description : trithorax-like protein 2
Gene families : OG0004303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004303_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00049p00115800 | SDG30, ATX2,... | Chromatin organisation.histone modifications.histone... | 0.08 | OrthoFinder output from all 47 species | |
Adi_g013424 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.06 | OrthoFinder output from all 47 species | |
Aev_g04886 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.05 | OrthoFinder output from all 47 species | |
Aev_g32400 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g02683 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.07 | OrthoFinder output from all 47 species | |
Als_g15203 | SDG30, ATX2 | class-III histone methyltransferase *(Trx) & original... | 0.02 | OrthoFinder output from all 47 species | |
Als_g32921 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.06 | OrthoFinder output from all 47 species | |
Aob_g29671 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.05 | OrthoFinder output from all 47 species | |
Aop_g20532 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene13213.t1 | SDG30, ATX2,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene13214.t1 | SDG30, ATX2,... | class-III histone methyltransferase *(Trx) & original... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0054.g033848 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.20G024500.1 | SDG30, ATX2,... | class-III histone methyltransferase *(Trx) & original... | 0.1 | OrthoFinder output from all 47 species | |
Dcu_g05840 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.09 | OrthoFinder output from all 47 species | |
Dde_g51047 | SDG30, ATX2 | class-III histone methyltransferase *(Trx) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g21792 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.04 | OrthoFinder output from all 47 species | |
Gb_04715 | No alias | Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
Gb_27375 | ATX1, SDG27 | class III/Trithorax histone methyltransferase component... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os09g04890.1 | SDG30, ATX2,... | Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... | 0.12 | OrthoFinder output from all 47 species | |
Lfl_g35891 | SDG30, ATX2 | class-III histone methyltransferase *(Trx) & original... | 0.04 | OrthoFinder output from all 47 species | |
Mp7g16780.1 | SDG30, ATX2 | Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... | 0.06 | OrthoFinder output from all 47 species | |
Msp_g13971 | SDG30, ATX2 | class-III histone methyltransferase *(Trx) & original... | 0.07 | OrthoFinder output from all 47 species | |
Ore_g34686 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g12237 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.06 | OrthoFinder output from all 47 species | |
Ppi_g22261 | SDG30, ATX2 | class-III histone methyltransferase *(Trx) & original... | 0.02 | OrthoFinder output from all 47 species | |
Solyc09g098260.3.1 | SDG30, ATX2,... | Histone-lysine N-methyltransferase ATX2 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g09107 | ATX1, SDG27 | class-III histone methyltransferase *(Trx) & original... | 0.05 | OrthoFinder output from all 47 species | |
Tin_g22080 | SDG30, ATX2 | class-III histone methyltransferase *(Trx) & original... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e033644_P001 | SDG30, ATX2,... | class III/Trithorax histone methyltransferase component... | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IMP | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | ISS | Interproscan |
MF | GO:0042800 | histone H3K4 methyltransferase activity | IMP | Interproscan |
BP | GO:0051568 | histone H3-K4 methylation | IMP | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000723 | telomere maintenance | IEP | HCCA |
BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | HCCA |
BP | GO:0000725 | recombinational repair | IEP | HCCA |
BP | GO:0000731 | DNA synthesis involved in DNA repair | IEP | HCCA |
BP | GO:0001676 | long-chain fatty acid metabolic process | IEP | HCCA |
BP | GO:0002213 | defense response to insect | IEP | HCCA |
BP | GO:0002376 | immune system process | IEP | HCCA |
BP | GO:0003006 | developmental process involved in reproduction | IEP | HCCA |
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | HCCA |
MF | GO:0003916 | DNA topoisomerase activity | IEP | HCCA |
MF | GO:0003917 | DNA topoisomerase type I (single strand cut, ATP-independent) activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
MF | GO:0004525 | ribonuclease III activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006265 | DNA topological change | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006301 | postreplication repair | IEP | HCCA |
BP | GO:0006302 | double-strand break repair | IEP | HCCA |
BP | GO:0006310 | DNA recombination | IEP | HCCA |
BP | GO:0006312 | mitotic recombination | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006950 | response to stress | IEP | HCCA |
BP | GO:0006952 | defense response | IEP | HCCA |
BP | GO:0006955 | immune response | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0007154 | cell communication | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
BP | GO:0007267 | cell-cell signaling | IEP | HCCA |
BP | GO:0007275 | multicellular organism development | IEP | HCCA |
BP | GO:0008284 | positive regulation of cell population proliferation | IEP | HCCA |
BP | GO:0009266 | response to temperature stimulus | IEP | HCCA |
BP | GO:0009314 | response to radiation | IEP | HCCA |
BP | GO:0009409 | response to cold | IEP | HCCA |
BP | GO:0009416 | response to light stimulus | IEP | HCCA |
BP | GO:0009605 | response to external stimulus | IEP | HCCA |
BP | GO:0009607 | response to biotic stimulus | IEP | HCCA |
BP | GO:0009615 | response to virus | IEP | HCCA |
BP | GO:0009616 | RNAi-mediated antiviral immune response | IEP | HCCA |
BP | GO:0009631 | cold acclimation | IEP | HCCA |
BP | GO:0009639 | response to red or far red light | IEP | HCCA |
BP | GO:0009640 | photomorphogenesis | IEP | HCCA |
BP | GO:0009756 | carbohydrate mediated signaling | IEP | HCCA |
BP | GO:0009790 | embryo development | IEP | HCCA |
BP | GO:0009791 | post-embryonic development | IEP | HCCA |
BP | GO:0009793 | embryo development ending in seed dormancy | IEP | HCCA |
BP | GO:0009845 | seed germination | IEP | HCCA |
BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
BP | GO:0009909 | regulation of flower development | IEP | HCCA |
BP | GO:0009911 | positive regulation of flower development | IEP | HCCA |
BP | GO:0009933 | meristem structural organization | IEP | HCCA |
BP | GO:0010016 | shoot system morphogenesis | IEP | HCCA |
BP | GO:0010050 | vegetative phase change | IEP | HCCA |
BP | GO:0010073 | meristem maintenance | IEP | HCCA |
BP | GO:0010162 | seed dormancy process | IEP | HCCA |
BP | GO:0010182 | sugar mediated signaling pathway | IEP | HCCA |
BP | GO:0010212 | response to ionizing radiation | IEP | HCCA |
BP | GO:0010216 | maintenance of DNA methylation | IEP | HCCA |
BP | GO:0010228 | vegetative to reproductive phase transition of meristem | IEP | HCCA |
BP | GO:0010267 | ta-siRNA processing | IEP | HCCA |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
CC | GO:0016035 | zeta DNA polymerase complex | IEP | HCCA |
BP | GO:0016233 | telomere capping | IEP | HCCA |
BP | GO:0016441 | post-transcriptional gene silencing | IEP | HCCA |
BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
BP | GO:0016569 | obsolete covalent chromatin modification | IEP | HCCA |
CC | GO:0016592 | mediator complex | IEP | HCCA |
MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | HCCA |
MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | HCCA |
BP | GO:0019827 | stem cell population maintenance | IEP | HCCA |
BP | GO:0019915 | lipid storage | IEP | HCCA |
BP | GO:0019985 | translesion synthesis | IEP | HCCA |
BP | GO:0022414 | reproductive process | IEP | HCCA |
BP | GO:0022611 | dormancy process | IEP | HCCA |
BP | GO:0023052 | signaling | IEP | HCCA |
BP | GO:0030422 | siRNA processing | IEP | HCCA |
CC | GO:0030870 | Mre11 complex | IEP | HCCA |
BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
MF | GO:0031490 | chromatin DNA binding | IEP | HCCA |
BP | GO:0032200 | telomere organization | IEP | HCCA |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | HCCA |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
BP | GO:0032501 | multicellular organismal process | IEP | HCCA |
BP | GO:0032502 | developmental process | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
MF | GO:0034061 | DNA polymerase activity | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0035194 | RNA-mediated post-transcriptional gene silencing | IEP | HCCA |
BP | GO:0035196 | miRNA processing | IEP | HCCA |
CC | GO:0042575 | DNA polymerase complex | IEP | HCCA |
BP | GO:0043207 | response to external biotic stimulus | IEP | HCCA |
BP | GO:0043687 | post-translational protein modification | IEP | HCCA |
BP | GO:0044419 | biological process involved in interspecies interaction between organisms | IEP | HCCA |
BP | GO:0045087 | innate immune response | IEP | HCCA |
BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0048439 | flower morphogenesis | IEP | HCCA |
BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
BP | GO:0048532 | anatomical structure arrangement | IEP | HCCA |
BP | GO:0048580 | regulation of post-embryonic development | IEP | HCCA |
BP | GO:0048582 | positive regulation of post-embryonic development | IEP | HCCA |
BP | GO:0048609 | multicellular organismal reproductive process | IEP | HCCA |
BP | GO:0048645 | animal organ formation | IEP | HCCA |
BP | GO:0048831 | regulation of shoot system development | IEP | HCCA |
BP | GO:0050793 | regulation of developmental process | IEP | HCCA |
BP | GO:0050826 | response to freezing | IEP | HCCA |
BP | GO:0051094 | positive regulation of developmental process | IEP | HCCA |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051235 | maintenance of location | IEP | HCCA |
BP | GO:0051239 | regulation of multicellular organismal process | IEP | HCCA |
BP | GO:0051240 | positive regulation of multicellular organismal process | IEP | HCCA |
BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0051276 | chromosome organization | IEP | HCCA |
BP | GO:0051607 | defense response to virus | IEP | HCCA |
BP | GO:0051707 | response to other organism | IEP | HCCA |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0070918 | regulatory ncRNA processing | IEP | HCCA |
BP | GO:0071103 | DNA conformation change | IEP | HCCA |
BP | GO:0071897 | DNA biosynthetic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0098542 | defense response to other organism | IEP | HCCA |
BP | GO:0098727 | maintenance of cell number | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
BP | GO:0140546 | defense response to symbiont | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | HCCA |
BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2000026 | regulation of multicellular organismal development | IEP | HCCA |
BP | GO:2000241 | regulation of reproductive process | IEP | HCCA |
BP | GO:2000243 | positive regulation of reproductive process | IEP | HCCA |
No external refs found! |