AT1G03475 (ATCPO-I, LIN2, HEMF1)


Aliases : ATCPO-I, LIN2, HEMF1

Description : Coproporphyrinogen III oxidase


Gene families : OG0002326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002326_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G03475
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00226710 ATCPO-I, LIN2,... Coenzyme metabolism.tetrapyrrol... 0.13 OrthoFinder output from all 47 species
Adi_g014456 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.04 OrthoFinder output from all 47 species
Adi_g019565 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Aev_g05297 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.06 OrthoFinder output from all 47 species
Aev_g43140 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Als_g05540 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species
Aob_g24817 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.04 OrthoFinder output from all 47 species
Aop_g02120 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.06 OrthoFinder output from all 47 species
Aop_g19843 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene27485.t1 hemf2, Aspi01Gene27485 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene37477.t1 ATCPO-I, LIN2,... EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Cba_g13302 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species
Ceric.38G006300.1 ATCPO-I, LIN2,... EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000471.12 ATCPO-I, LIN2, HEMF1 Coenzyme metabolism.tetrapyrrol... 0.05 OrthoFinder output from all 47 species
Cre02.g092600 ATCPO-I, LIN2, HEMF1 Coenzyme metabolism.tetrapyrrol... 0.06 OrthoFinder output from all 47 species
Dac_g12105 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Dac_g14629 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.04 OrthoFinder output from all 47 species
Dcu_g50906 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Dde_g07551 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.04 OrthoFinder output from all 47 species
Ehy_g19845 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.07 OrthoFinder output from all 47 species
GSVIVT01015906001 ATCPO-I, LIN2, HEMF1 Coenzyme metabolism.tetrapyrrol... 0.22 OrthoFinder output from all 47 species
Len_g00546 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.09 OrthoFinder output from all 47 species
Lfl_g01305 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Lfl_g09131 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
MA_393193g0010 ATCPO-I, LIN2, HEMF1 oxygen-dependent coproporphyrinogen III oxidase (HemF) 0.04 OrthoFinder output from all 47 species
MA_73740g0010 ATCPO-I, LIN2, HEMF1 oxygen-dependent coproporphyrinogen III oxidase (HemF) 0.08 OrthoFinder output from all 47 species
Mp3g17410.1 ATCPO-I, LIN2, HEMF1 oxygen-dependent coproporphyrinogen III oxidase (HemF) 0.28 OrthoFinder output from all 47 species
Msp_g01613 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.04 OrthoFinder output from all 47 species
Nbi_g00642 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.07 OrthoFinder output from all 47 species
Ore_g20475 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species
Pnu_g18858 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Pp3c22_5800V3.1 ATCPO-I, LIN2,... Coproporphyrinogen III oxidase 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018497 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0131.g022123 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.05 OrthoFinder output from all 47 species
Sam_g11968 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Sam_g37582 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 OrthoFinder output from all 47 species
Smo131328 ATCPO-I, LIN2, HEMF1 Coenzyme metabolism.tetrapyrrol... 0.06 OrthoFinder output from all 47 species
Solyc10g005110.3.1 ATCPO-I, LIN2,... oxygen-dependent coproporphyrinogen III oxidase (HemF) 0.16 OrthoFinder output from all 47 species
Spa_g09845 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Spa_g16345 ATCPO-I, LIN2, HEMF1 EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.03 OrthoFinder output from all 47 species
Zm00001e006977_P001 ATCPO-I, LIN2,... oxygen-dependent coproporphyrinogen III oxidase (HemF) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IGI Interproscan
MF GO:0004109 coproporphyrinogen oxidase activity ISS Interproscan
BP GO:0006364 rRNA processing RCA Interproscan
BP GO:0009073 aromatic amino acid family biosynthetic process RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009536 plastid IDA Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
BP GO:0009735 response to cytokinin IDA Interproscan
BP GO:0009965 leaf morphogenesis RCA Interproscan
BP GO:0015995 chlorophyll biosynthetic process RCA Interproscan
BP GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione RCA Interproscan
BP GO:0019344 cysteine biosynthetic process RCA Interproscan
BP GO:0030154 cell differentiation RCA Interproscan
BP GO:0033014 tetrapyrrole biosynthetic process IC Interproscan
BP GO:0045893 positive regulation of DNA-templated transcription RCA Interproscan
CC GO:0048046 apoplast IDA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003727 single-stranded RNA binding IEP HCCA
MF GO:0003913 DNA photolyase activity IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006098 pentose-phosphate shunt IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006458 'de novo' protein folding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006740 NADPH regeneration IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008187 poly-pyrimidine tract binding IEP HCCA
BP GO:0008219 cell death IEP HCCA
MF GO:0008266 poly(U) RNA binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
CC GO:0009368 endopeptidase Clp complex IEP HCCA
BP GO:0009409 response to cold IEP HCCA
CC GO:0009526 plastid envelope IEP HCCA
CC GO:0009535 chloroplast thylakoid membrane IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
BP GO:0009668 plastid membrane organization IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009773 photosynthetic electron transport in photosystem I IEP HCCA
CC GO:0009840 chloroplastic endopeptidase Clp complex IEP HCCA
BP GO:0009902 chloroplast relocation IEP HCCA
CC GO:0009941 chloroplast envelope IEP HCCA
BP GO:0010027 thylakoid membrane organization IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0010267 ta-siRNA processing IEP HCCA
CC GO:0010319 stromule IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016108 tetraterpenoid metabolic process IEP HCCA
BP GO:0016109 tetraterpenoid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0016116 carotenoid metabolic process IEP HCCA
BP GO:0016117 carotenoid biosynthetic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016869 intramolecular transferase activity, transferring amino groups IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019750 chloroplast localization IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031975 envelope IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
MF GO:0042286 glutamate-1-semialdehyde 2,1-aminomutase activity IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0042793 plastid transcription IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0046471 phosphatidylglycerol metabolic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0048506 regulation of timing of meristematic phase transition IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP HCCA
BP GO:0051084 'de novo' post-translational protein folding IEP HCCA
BP GO:0051085 chaperone cofactor-dependent protein refolding IEP HCCA
BP GO:0051156 glucose 6-phosphate metabolic process IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051644 plastid localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051656 establishment of organelle localization IEP HCCA
BP GO:0051667 establishment of plastid localization IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
CC GO:0055035 plastid thylakoid membrane IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0061077 chaperone-mediated protein folding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001260 Coprogen_oxidase_aer 84 386
No external refs found!