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  5. Pnu_g27084

Pnu_g27084


Description : not classified & original description: none


Gene families : OG0002005 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g27084
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00075p00066800 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G16320 No alias Uncharacterized conserved protein (DUF2358) 0.02 OrthoFinder output from all 47 species
Adi_g015190 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04547 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g18668 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g01620 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g60853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28607 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g05920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06419 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g10474 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.07G081200.1 Ceric.07G081200 not classified & original description: pacid=50628006... 0.06 OrthoFinder output from all 47 species
Dcu_g02631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02222 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g12200.1 LOC_Os01g12200 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g52330.1 LOC_Os04g52330 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g12474.1 LOC_Os05g12474 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g03130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_24423g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_930475g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g05550 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32987 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g59584 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29744 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g15153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006957_P001 Zm00001e006957 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e041633_P001 Zm00001e041633 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0110102 ribulose bisphosphate carboxylase complex assembly IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR018790 DUF2358 178 287
No external refs found!