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  5. Pnu_g20562

Pnu_g20562


Description : component *(MED3/MED27) of tail module of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0007757 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007757_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g20562

Target Alias Description ECC score Gene Family Method Actions
Als_g06207 No alias component *(MED3/MED27) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Len_g24464 No alias component *(MED3/MED27) of tail module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Lfl_g01579 No alias component *(MED3/MED27) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Zm00001e020121_P001 Zm00001e020121 component MED3/MED27 of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016592 mediator complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP HCCA
CC GO:0005849 mRNA cleavage factor complex IEP HCCA
BP GO:0006378 mRNA polyadenylation IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR021627 Mediator_Med27 394 495
No external refs found!