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  5. Pnu_g16898

Pnu_g16898 (DCP5)


Aliases : DCP5

Description : not classified & original description: none


Gene families : OG0001620 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001620_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g16898
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Adi_g026131 DCP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g58338 DCP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05270 DCP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14170 DCP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G085100.1 DCP5, Ceric.20G085100 not classified & original description: pacid=50567155... 0.04 OrthoFinder output from all 47 species
Ehy_g08627 DCP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032123001 No alias No description available 0.02 OrthoFinder output from all 47 species
Nbi_g01307 DCP5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16576 DCP5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025652_P002 DCP5, Zm00001e025652 regulatory component DCP5 of mRNA decapping complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR019050 FDF_dom 445 546
IPR025609 Lsm14-like_N 11 84
No external refs found!