Heatmap: Cluster_40 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	Aerial Stem	Mature Aerial Stem	Syangia	Rhizome
Pnu_g00269	0.64	0.91	-0.88	-5.76
Pnu_g00509 (RSR4)	0.17	0.17	-0.1	-0.3
Pnu_g00761	0.06	0.06	0.05	-0.18
Pnu_g01650	-0.02	0.1	-0.04	-0.05
Pnu_g01794	-0.17	0.12	-0.22	0.22
Pnu_g02071 (PUX4)	0.1	0.29	-0.34	-0.13
Pnu_g02276 (LSD1)	0.11	0.21	-0.27	-0.1
Pnu_g02359 (PBA1)	-0.04	0.07	-0.02	-0.01
Pnu_g02558	0.0	0.08	0.03	-0.11
Pnu_g03381	0.08	0.11	-0.05	-0.16
Pnu_g03486	-0.14	0.1	0.02	0.01
Pnu_g03571	0.06	0.57	-0.89	-0.1
Pnu_g03679	0.15	0.53	-0.41	-0.52
Pnu_g03688 (RPS5B)	-0.1	0.1	0.04	-0.05
Pnu_g03937	0.08	0.32	-0.66	0.09
Pnu_g04037	-0.06	0.04	0.06	-0.04
Pnu_g04248 (HEN2)	-0.09	0.05	0.1	-0.07
Pnu_g04466	0.09	0.19	-0.15	-0.15
Pnu_g04484	0.08	0.37	-0.49	-0.09
Pnu_g04542	0.2	0.35	-0.4	-0.28
Pnu_g05141	0.24	0.32	-0.62	-0.12
Pnu_g05190	0.07	0.02	0.02	-0.13
Pnu_g05287	0.4	1.04	-0.66	-
Pnu_g05774 (SSL5)	-0.08	0.16	-0.07	-0.03
Pnu_g05800 (GRP2)	0.03	0.13	-0.24	0.05
Pnu_g05860	-0.04	0.22	0.04	-0.25
Pnu_g05875	0.09	0.32	-0.43	-0.07
Pnu_g05884 (CSD1)	-0.09	0.03	0.01	0.05
Pnu_g05891	-0.12	0.13	0.06	-0.09
Pnu_g06249	0.01	0.28	-0.39	0.02
Pnu_g06918	0.03	0.23	-0.25	-0.05
Pnu_g07172	0.07	0.19	-0.27	-0.03
Pnu_g07298	0.05	0.13	-0.21	0.01
Pnu_g07358	0.04	0.07	-0.08	-0.04
Pnu_g07372	0.01	0.16	-0.06	-0.12
Pnu_g07394	0.11	0.2	-0.22	-0.14
Pnu_g07571 (KLK)	0.04	0.06	-0.05	-0.05
Pnu_g07704	0.03	0.01	0.06	-0.1
Pnu_g07990 (MPPalpha)	0.14	0.19	-0.26	-0.12
Pnu_g08254 (P40)	-0.03	0.12	0.07	-0.19
Pnu_g08257 (DWA1)	0.12	0.2	-0.24	-0.12
Pnu_g08441	0.09	0.16	-0.19	-0.08
Pnu_g08551 (AFH14)	0.26	0.13	-0.22	-0.24
Pnu_g08562 (MUR3)	0.07	0.2	-0.1	-0.2
Pnu_g08615	0.01	0.07	0.02	-0.11
Pnu_g08989 (FZR2)	0.06	0.16	-0.04	-0.21
Pnu_g09305	-0.05	0.08	-0.03	-0.01
Pnu_g09346	0.06	0.17	-0.08	-0.17
Pnu_g09523	0.04	0.22	-0.14	-0.15
Pnu_g09571 (mMDH1)	-0.04	0.04	0.05	-0.06
Pnu_g09691	0.1	0.15	-0.07	-0.2
Pnu_g09694	0.08	0.15	-0.11	-0.14
Pnu_g09900 (PFT1)	0.12	0.15	-0.1	-0.21
Pnu_g09945 (PLD)	-0.13	0.12	-0.03	0.02
Pnu_g10222	-0.03	0.19	-0.12	-0.05
Pnu_g10332	0.23	0.51	-0.61	-0.42
Pnu_g10406	0.03	0.16	-0.3	0.07
Pnu_g10541	0.06	-0.0	0.03	-0.08
Pnu_g10781	0.54	0.83	-0.66	-2.96
Pnu_g10871	-0.01	0.12	-0.02	-0.11
Pnu_g10923	-0.0	0.25	-0.22	-0.07
Pnu_g11200	0.04	0.15	-0.18	-0.02
Pnu_g11230	0.01	0.1	-0.0	-0.11
Pnu_g11244	0.1	0.29	-0.26	-0.2
Pnu_g11277 (PFK2)	0.04	0.08	0.01	-0.15
Pnu_g11377	0.01	0.49	-0.18	-0.51
Pnu_g11449	0.08	0.18	-0.32	0.01
Pnu_g11516	0.11	0.04	-0.06	-0.09
Pnu_g11563 (TOM20-3)	0.04	0.07	-0.06	-0.06
Pnu_g11700	0.03	0.09	-0.13	-0.0
Pnu_g12026 (HB-4)	-0.01	0.18	-0.14	-0.05
Pnu_g12369 (RBP47C')	-0.02	0.11	0.01	-0.1
Pnu_g12419	0.07	0.11	-0.21	0.02
Pnu_g12534	0.03	0.07	-0.05	-0.06
Pnu_g12594	0.04	0.26	-0.18	-0.16
Pnu_g12599	-0.01	0.19	-0.11	-0.09
Pnu_g12718	0.19	0.21	-0.22	-0.24
Pnu_g12799 (THO7)	0.03	0.38	-0.34	-0.17
Pnu_g12943	0.06	0.1	-0.02	-0.15
Pnu_g13147 (MTM1)	-0.01	0.19	-0.05	-0.15
Pnu_g13414 (IDH-III)	0.08	0.19	-0.25	-0.06
Pnu_g13508 (DSK2)	-0.0	0.09	-0.11	0.01
Pnu_g13522	0.15	0.22	-0.15	-0.28
Pnu_g14033	0.49	0.93	-0.83	-3.06
Pnu_g14097 (bZIP68)	-0.0	0.08	0.07	-0.16
Pnu_g14844	0.06	0.04	0.09	-0.21
Pnu_g14969	0.11	0.18	-0.12	-0.21
Pnu_g15319 (CRR2)	0.06	0.15	-0.08	-0.15
Pnu_g15351	0.09	0.29	-0.38	-0.08
Pnu_g15355	0.03	0.17	-0.37	0.11
Pnu_g15493 (CRR22)	0.18	0.18	-0.5	0.03
Pnu_g15534	0.19	0.31	-0.26	-0.35
Pnu_g15559	0.04	0.3	-0.29	-0.1
Pnu_g15726	0.02	0.11	0.03	-0.17
Pnu_g15832	-0.01	0.32	-0.27	-0.1
Pnu_g15969	0.07	0.2	-0.06	-0.24
Pnu_g15974	0.12	0.48	-0.4	-0.38
Pnu_g16030	-0.01	0.02	-0.02	0.01
Pnu_g16170	0.1	0.13	-0.18	-0.07
Pnu_g16407	0.2	0.42	-0.61	-0.21
Pnu_g16541	0.16	0.31	-0.24	-0.32
Pnu_g16657 (CRR22)	0.04	0.12	-0.06	-0.12
Pnu_g16786	0.06	0.16	-0.02	-0.23
Pnu_g16898 (DCP5)	0.03	0.12	0.01	-0.17
Pnu_g17069	-0.08	0.06	-0.0	0.02
Pnu_g17163	0.3	0.19	-0.22	-0.36
Pnu_g17204	0.34	0.16	-0.13	-0.52
Pnu_g17288	0.02	-0.01	-0.02	0.02
Pnu_g17338 (ATDAD1)	0.05	0.04	-0.1	-0.0
Pnu_g17385	0.1	0.09	-0.04	-0.17
Pnu_g17439	0.03	0.08	-0.06	-0.06
Pnu_g17445	0.17	0.12	-0.17	-0.16
Pnu_g17616	0.02	0.1	-0.14	0.0
Pnu_g17843	0.05	0.12	-0.07	-0.11
Pnu_g17926 (TRN1)	0.02	0.08	-0.16	0.05
Pnu_g18103 (SEU)	-0.04	0.18	-0.07	-0.08
Pnu_g18142	0.24	0.41	-0.4	-0.45
Pnu_g18314	0.12	0.1	-0.1	-0.13
Pnu_g18419 (DBP1)	0.13	0.1	-0.21	-0.04
Pnu_g19591 (MCB1)	-0.01	0.27	-0.23	-0.09
Pnu_g19710	0.05	0.18	-0.31	0.04
Pnu_g19769	0.04	0.02	-0.01	-0.05
Pnu_g19828	0.14	0.24	-0.65	0.11
Pnu_g20150	0.01	0.25	-0.02	-0.3
Pnu_g20286	-0.07	0.2	-0.19	0.03
Pnu_g21152	0.11	0.11	-0.23	-0.02
Pnu_g21637	0.0	0.44	-0.11	-0.48
Pnu_g22218	0.11	0.36	-0.28	-0.29
Pnu_g23075	0.12	0.21	-0.09	-0.3
Pnu_g23094	-0.17	0.18	0.19	-0.27
Pnu_g23161	0.17	0.04	0.11	-0.38
Pnu_g23560 (REME1)	0.18	0.22	-0.21	-0.26
Pnu_g24207	0.19	0.32	-0.54	-0.11
Pnu_g24779	0.12	0.35	-0.38	-0.2
Pnu_g24813	0.07	0.11	-0.05	-0.14
Pnu_g25082	0.06	0.16	-0.03	-0.2
Pnu_g25630	0.05	0.03	-0.19	0.09
Pnu_g26059 (EIF3C)	-0.16	0.51	0.07	-0.67
Pnu_g26090 (MED8)	0.02	0.12	-0.05	-0.09
Pnu_g26179	-0.02	0.46	-0.66	0.0
Pnu_g26301	-0.13	0.06	-0.0	0.07
Pnu_g26692	-0.04	0.49	-0.13	-0.51
Pnu_g26700 (MCB1)	-0.07	0.29	-0.28	0.01
Pnu_g27163	-0.06	0.15	-0.09	-0.01
Pnu_g27467	0.17	0.25	-0.48	-0.05
Pnu_g27976	-0.04	0.1	0.02	-0.08
Pnu_g28261	0.18	0.2	-0.38	-0.06
Pnu_g29761	-0.04	0.14	-0.08	-0.03
Pnu_g29801	0.02	0.15	-0.15	-0.03
Pnu_g29809	0.04	0.23	-0.08	-0.23
Pnu_g30091 (CRR2)	-0.07	0.12	-0.04	-0.02
Pnu_g30140	-0.14	0.18	-0.08	0.02
Pnu_g30309 (CRR2)	0.17	0.2	-0.28	-0.14
Pnu_g30421	0.07	0.25	-0.09	-0.27
Pnu_g31205 (BSL3)	0.06	0.19	-0.34	0.04
Pnu_g31344	0.05	0.39	-0.44	-0.13
Pnu_g31543 (RAD23)	-0.02	0.07	0.07	-0.13
Pnu_g32005 (SPL7)	0.1	0.11	-0.12	-0.11
Pnu_g32727	0.08	0.22	-0.27	-0.08
Pnu_g32732	-0.01	0.23	-0.19	-0.06
Pnu_g33742	-0.04	0.18	-0.0	-0.15
Pnu_g33772	0.07	-0.01	0.0	-0.07
Pnu_g33924	0.02	0.16	-0.23	0.02

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.