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Heatmap: Cluster_40 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
1.98 2.4 0.69 0.02
Pnu_g00509 (RSR4)
 358.34 358.28 296.9 258.16
12.23 12.24 12.16 10.36
26.31 28.54 25.95 25.74
21.97 26.92 21.31 28.72
Pnu_g02071 (PUX4)
 33.56 38.19 24.79 28.57
Pnu_g02276 (LSD1)
 78.3 84.14 60.18 67.79
Pnu_g02359 (PBA1)
 195.48 211.79 197.96 199.94
60.86 64.16 62.02 56.3
23.95 24.36 21.86 20.28
5.42 6.38 6.03 6.02
136.05 193.38 70.21 121.62
7.36 9.54 4.97 4.63
Pnu_g03688 (RPS5B)
 199.95 229.01 220.16 207.47
180.87 213.15 108.62 182.38
32.86 35.31 35.59 33.2
Pnu_g04248 (HEN2)
 6.5 7.14 7.4 6.6
4.98 5.34 4.23 4.22
6.84 8.35 4.63 6.11
2.34 2.6 1.55 1.68
263.44 278.14 144.71 204.7
19.57 18.86 18.89 17.04
3.0 4.66 1.44 0.0
Pnu_g05774 (SSL5)
 82.51 97.58 83.26 85.24
Pnu_g05800 (GRP2)
 81.49 87.91 67.89 83.07
72.87 87.05 76.8 63.11
26.89 31.54 18.76 24.03
Pnu_g05884 (CSD1)
 390.78 426.94 420.39 431.38
74.49 88.7 84.68 76.27
511.54 615.88 386.11 514.1
179.65 205.92 147.26 169.87
343.22 373.57 271.06 321.05
96.16 101.15 80.19 93.19
16.08 16.42 14.84 15.24
92.84 102.87 88.62 84.72
41.65 44.33 33.2 34.98
Pnu_g07571 (KLK)
 10.33 10.44 9.68 9.69
7.94 7.84 8.07 7.22
Pnu_g07990 (MPPalpha)
 45.21 46.82 34.32 37.82
Pnu_g08254 (P40)
 208.32 230.83 223.67 186.58
Pnu_g08257 (DWA1)
 15.22 16.09 11.85 12.85
118.95 125.01 98.47 106.02
Pnu_g08551 (AFH14)
 4.14 3.8 2.97 2.93
Pnu_g08562 (MUR3)
 9.51 10.4 8.45 7.9
27.21 28.38 27.51 25.07
Pnu_g08989 (FZR2)
 6.51 6.95 6.06 5.38
111.33 122.3 113.2 114.55
42.39 45.72 38.35 36.12
5.79 6.55 5.12 5.09
Pnu_g09571 (mMDH1)
 97.92 103.78 104.47 96.68
72.22 74.72 64.31 58.59
35.57 37.43 31.3 30.56
Pnu_g09900 (PFT1)
 43.17 44.07 36.97 34.31
Pnu_g09945 (PLD)
 23.27 27.68 24.91 25.8
78.54 91.14 73.44 77.18
9.94 11.99 5.54 6.31
78.09 85.52 62.25 80.24
48.46 46.35 47.38 43.86
4.63 5.65 2.01 0.41
34.09 37.25 33.75 31.74
25.08 29.93 21.5 23.98
37.29 40.07 31.88 35.66
127.5 136.1 126.59 117.81
16.4 18.62 12.76 13.23
Pnu_g11277 (PFK2)
 58.91 60.59 57.8 51.51
126.15 175.34 110.18 87.86
65.6 70.46 49.68 62.52
12.57 11.99 11.17 10.95
Pnu_g11563 (TOM20-3)
 112.75 115.57 105.09 105.62
32.16 33.47 28.73 31.37
Pnu_g12026 (HB-4)
 16.7 18.98 15.24 16.19
Pnu_g12369 (RBP47C')
 26.95 29.54 27.5 25.58
121.72 124.65 99.85 117.24
172.04 177.1 162.55 162.03
68.29 79.45 58.78 59.49
58.84 67.4 54.75 55.47
5.65 5.73 4.24 4.18
Pnu_g12799 (THO7)
 28.18 36.11 21.79 24.57
36.58 37.72 34.77 31.75
Pnu_g13147 (MTM1)
 44.84 51.81 43.65 40.86
Pnu_g13414 (IDH-III)
 103.9 112.2 82.91 94.25
Pnu_g13508 (DSK2)
 72.28 76.8 67.16 73.05
26.93 28.19 21.92 20.05
2.12 2.88 0.84 0.18
Pnu_g14097 (bZIP68)
 22.33 23.64 23.46 20.03
237.2 233.67 241.24 196.03
4.29 4.53 3.67 3.46
Pnu_g15319 (CRR2)
 7.32 7.78 6.64 6.31
25.8 29.79 18.67 23.02
19.39 21.35 14.63 20.37
Pnu_g15493 (CRR22)
 3.88 3.9 2.43 3.51
25.61 27.76 18.81 17.62
12.45 14.88 9.9 11.28
3.86 4.14 3.89 3.4
13.37 16.73 11.13 12.52
10.49 11.5 9.58 8.5
3.73 4.78 2.6 2.63
115.82 118.38 115.1 117.46
10.54 10.69 8.64 9.34
22.94 26.75 13.14 17.31
11.58 12.8 8.77 8.27
Pnu_g16657 (CRR22)
 14.22 14.98 13.26 12.7
263.69 282.2 249.06 216.12
Pnu_g16898 (DCP5)
 43.11 45.78 42.5 37.57
126.46 140.0 133.53 135.37
40.53 37.64 28.27 25.66
5.1 4.52 3.7 2.82
9.69 9.45 9.39 9.65
Pnu_g17338 (ATDAD1)
 65.75 65.41 59.34 63.31
32.72 32.3 29.59 27.13
223.09 231.09 208.75 208.92
52.02 50.19 41.1 41.18
4.44 4.71 3.99 4.39
53.93 56.56 49.53 48.28
Pnu_g17926 (TRN1)
 15.38 16.04 13.64 15.76
Pnu_g18103 (SEU)
 45.84 53.26 45.0 44.48
6.78 7.67 4.35 4.21
10.44 10.32 9.0 8.79
Pnu_g18419 (DBP1)
 8.74 8.53 6.91 7.74
Pnu_g19591 (MCB1)
 35.33 42.8 30.33 33.39
3.8 4.15 2.97 3.77
12.92 12.71 12.43 12.13
73.95 79.32 42.71 72.24
18.67 22.1 18.31 15.05
103.35 125.18 95.34 110.55
72.44 72.59 57.32 66.26
10.19 13.8 9.46 7.28
7.55 8.98 5.79 5.73
3.56 3.8 3.07 2.67
2.2 2.8 2.81 2.05
59.57 54.68 57.33 40.63
Pnu_g23560 (REME1)
 5.85 5.99 4.44 4.31
77.33 84.61 46.47 62.7
25.53 29.81 18.03 20.47
38.22 39.21 34.99 32.91
34.04 36.45 31.94 28.43
15.25 15.08 12.91 15.66
Pnu_g26059 (EIF3C)
 28.66 45.47 33.56 20.13
Pnu_g26090 (MED8)
 14.03 14.98 13.31 12.95
57.93 80.42 37.16 58.77
10.32 11.75 11.3 11.84
1.65 2.38 1.55 1.19
Pnu_g26700 (MCB1)
 33.37 42.57 28.67 35.04
22.34 25.88 21.94 23.18
24.76 26.08 15.76 21.28
59.43 65.47 62.21 57.79
48.78 49.5 33.04 41.26
9.14 10.37 8.92 9.23
71.08 77.89 63.28 68.79
3.54 4.03 3.25 2.94
Pnu_g30091 (CRR2)
 4.08 4.66 4.15 4.22
19.99 25.0 20.88 22.46
Pnu_g30309 (CRR2)
 3.0 3.08 2.2 2.42
19.86 22.54 17.78 15.72
Pnu_g31205 (BSL3)
 43.37 47.41 32.95 42.7
18.09 22.94 12.85 15.92
Pnu_g31543 (RAD23)
 28.98 30.84 30.89 26.83
Pnu_g32005 (SPL7)
 3.4 3.44 2.93 2.94
19.93 21.91 15.62 17.84
61.2 72.43 54.08 59.39
35.77 41.65 36.84 33.17
12.82 12.14 12.23 11.64
26.98 29.86 22.68 27.04

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)