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  5. Als_g54203

Als_g54203 (OHP)


Aliases : OHP

Description : LHC-related protein *(OHP1) & original description: none


Gene families : OG0006730 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006730_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g54203
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00252840 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
AT5G02120 OHP one helix protein 0.03 OrthoFinder output from all 47 species
Aev_g44873 OHP LHC-related protein *(OHP1) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05451 OHP LHC-related protein *(OHP1) & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g48648 OHP LHC-related protein *(OHP1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.35G031400.1 OHP, Ceric.35G031400 LHC-related protein *(OHP1) & original description:... 0.07 OrthoFinder output from all 47 species
Cre02.g109950 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Dac_g27459 OHP LHC-related protein *(OHP1) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g00111 OHP LHC-related protein *(OHP1) & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01034129001 OHP Photosynthesis.photophosphorylation.photosystem... 0.06 OrthoFinder output from all 47 species
LOC_Os05g22730.1 OHP, LOC_Os05g22730 OHP1 LHC-related protein 0.05 OrthoFinder output from all 47 species
Len_g29330 OHP LHC-related protein *(OHP1) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24229 No alias LHC-related protein *(OHP1) & original description: none 0.05 OrthoFinder output from all 47 species
MA_10117352g0010 OHP OHP1 LHC-related protein 0.03 OrthoFinder output from all 47 species
Msp_g18578 OHP LHC-related protein *(OHP1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08209 OHP LHC-related protein *(OHP1) & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g60607 OHP LHC-related protein *(OHP1) & original description: none 0.08 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015925 OHP LHC-related protein *(OHP1) & original description: CDS=1-414 0.04 OrthoFinder output from all 47 species
Sam_g30283 No alias LHC-related protein *(OHP1) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc09g011010.3.1 OHP, Solyc09g011010 OHP1 LHC-related protein 0.03 OrthoFinder output from all 47 species
Tin_g10723 OHP LHC-related protein *(OHP1) & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e032810_P001 OHP, Zm00001e032810 OHP1 LHC-related protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004332 fructose-bisphosphate aldolase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!