Aliases : MRP11, ABCC13, ATMRP11
Description : subfamily ABCC transporter & original description: none
Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Als_g16591 | MRP6, ATMRP6, ABCC8 | subfamily ABCC transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000718.1 | AtABCC2, ABCC2,... | ABC transporter C family member 2 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000718.2 | AtABCC2, ABCC2,... | ABC transporter C family member 2 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000718.3 | ATMRP8, MRP8, ABCC6 | ABC transporter C family member 6 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001024.2 | AtABCC2, ABCC2,... | ABC transporter C family member 14 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00001729.6 | ABCC1, ATABCC1,... | Solute transport.primary active transport.ABC... | 0.01 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020553.190 | ATABCC5, MRP5,... | ABC transporter C family member 4 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020592.4 | ATMRP12, MRP12, ABCC11 | ABC transporter C family member 1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Dac_g36055 | MRP10, ATMRP10, ABCC14 | subfamily ABCC transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g04046 | MRP10, ATMRP10, ABCC14 | subfamily ABCC transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Gb_12836 | ATMRP14, ABCC10, MRP14 | ABC transporter C family member 10 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Len_g22379 | MRP6, ATMRP6, ABCC8 | subfamily ABCC transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g24237 | MRP10, ATMRP10, ABCC14 | subfamily ABCC transporter & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g18217 | ABCC3, ATMRP3, MRP3 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g38983 | ATABCC5, MRP5,... | subfamily ABCC transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Mp5g13190.1 | MRP10, ATMRP10, ABCC14 | subfamily ABCC transporter | 0.02 | OrthoFinder output from all 47 species | |
Pir_g56076 | AtABCC2, ABCC2,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g59892 | MRP6, ATMRP6, ABCC8 | subfamily ABCC transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g24499 | No alias | subfamily ABCC transporter & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g29278 | No alias | glutathione S-conjugate transporter & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g20006 | EST3, MRP4, ATMRP4, ABCC4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0003972 | RNA ligase (ATP) activity | IEP | HCCA |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
MF | GO:0004814 | arginine-tRNA ligase activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
MF | GO:0008452 | RNA ligase activity | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016874 | ligase activity | IEP | HCCA |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0043038 | amino acid activation | IEP | HCCA |
BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No external refs found! |