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  5. Als_g41842

Als_g41842 (ATVAMP712, VAMP712)


Aliases : ATVAMP712, VAMP712

Description : R-type VAMP7-group component of SNARE longin membrane fusion complex & original description: none


Gene families : OG0002036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002036_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Als_g41842
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
AT2G25340 ATVAMP712, VAMP712 vesicle-associated membrane protein 712 0.02 OrthoFinder output from all 47 species
AT4G32150 ATVAMP711, VAMP711 vesicle-associated membrane protein 711 0.03 OrthoFinder output from all 47 species
Aop_g02450 ATVAMP711, VAMP711 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Cba_g10299 ATVAMP711, VAMP711 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Dde_g02689 ATVAMP711, VAMP711 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
GSVIVT01035876001 ATVAMP711, VAMP711 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
Ore_g10414 VAMP714, ATVAMP714 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Zm00001e024278_P001 VAMP714,... VAMP7-type R-type SNARE longin protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 30 109
IPR042855 V_SNARE_CC 125 212
No external refs found!