Als_g38116 (GAD, GAD1)

Aliases : GAD, GAD1

Description : glutamate decarboxylase *(GAD) & original description: none

Gene families : OG0000690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000690_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Als_g38116
Cluster	HCCA: Cluster_129

Target	Alias	Description	ECC score	Gene Family Method
AT1G65960	GAD2	glutamate decarboxylase 2	0.02	OrthoFinder output from all 47 species
AT5G17330	GAD, GAD1	glutamate decarboxylase	0.03	OrthoFinder output from all 47 species
Azfi_s0034.g025327	GAD, GAD1	glutamate decarboxylase *(GAD) & original description:...	0.03	OrthoFinder output from all 47 species
Cba_g06463	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g03311	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g10779	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01000391001	GAD, GAD1	Amino acid metabolism.biosynthesis.glutamate...	0.02	OrthoFinder output from all 47 species
GSVIVT01011565001	GAD, GAD1	Amino acid metabolism.biosynthesis.glutamate...	0.02	OrthoFinder output from all 47 species
LOC_Os03g51080.1	GAD, GAD1, LOC_Os03g51080	glutamate decarboxylase	0.02	OrthoFinder output from all 47 species
LOC_Os08g36320.1	GAD, GAD1, LOC_Os08g36320	glutamate decarboxylase	0.02	OrthoFinder output from all 47 species
Len_g29680	GAD2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g22346	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.04	OrthoFinder output from all 47 species
MA_102154g0010	GAD, GAD1	Glutamate decarboxylase 4 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Nbi_g15690	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g06503	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g61216	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g17072	GAD, GAD1	glutamate decarboxylase *(GAD) & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020087	GAD4	glutamate decarboxylase *(GAD) & original description:...	0.02	OrthoFinder output from all 47 species
Solyc04g025530.3.1	GAD4, Solyc04g025530	glutamate decarboxylase	0.04	OrthoFinder output from all 47 species
Spa_g12089	GAD4	glutamate decarboxylase *(GAD) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e007985_P001	GAD4, Zm00001e007985	glutamate decarboxylase	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	IEA	Interproscan
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0003839	gamma-glutamylcyclotransferase activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004252	serine-type endopeptidase activity	IEP	HCCA
BP	GO:0006325	chromatin organization	IEP	HCCA
BP	GO:0006334	nucleosome assembly	IEP	HCCA
BP	GO:0006338	chromatin remodeling	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006749	glutathione metabolic process	IEP	HCCA
BP	GO:0006751	glutathione catabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	HCCA
MF	GO:0016842	amidine-lyase activity	IEP	HCCA
BP	GO:0034728	nucleosome organization	IEP	HCCA
BP	GO:0042219	cellular modified amino acid catabolic process	IEP	HCCA
BP	GO:0043171	peptide catabolic process	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
BP	GO:0044273	sulfur compound catabolic process	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0065004	protein-DNA complex assembly	IEP	HCCA
BP	GO:0071824	protein-DNA complex subunit organization	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002129	PyrdxlP-dep_de-COase	43	385

External Links

No external refs found!

Als_g38116 (GAD, GAD1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation