Aliases : PIF3, POC1, PAP3
Description : bHLH-type transcription factor & original description: none
Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00039p00032460 | PIL5, PIF1,... | External stimuli response.light.red/far red light.PIF... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00133p00027110 | BPEp, ZCW32,... | External stimuli response.light.UV-A/blue... | 0.03 | OrthoFinder output from all 47 species | |
AT2G42300 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
Als_g61959 | PIL5, PIF1 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene25247.t2 | LRL3, Aspi01Gene25247 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene35112.t1 | SPT, Aspi01Gene35112 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene40584.t1 | Aspi01Gene40584 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0001.g000265 | No alias | regulatory protein (CIB) of blue light perception &... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0013.g013357 | No alias | bHLH-type transcription factor & original description: CDS=1-633 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0054.g033854 | No alias | bHLH-type transcription factor & original description: CDS=1-1758 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0194.g057160 | LRL3 | not classified & original description: CDS=242-550 | 0.05 | OrthoFinder output from all 47 species | |
Cba_g18078 | HEC2 | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g00562 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g18466 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g31834 | SPT | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g58330.1 | UNE12, LOC_Os03g58330 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
Len_g11076 | PIF3, POC1, PAP3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g14229 | SPT | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g49441 | SPT | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g18800 | LRL3 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g09011 | SPT | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g03844 | SPT | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g19414 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g43991 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0051.g013890 | LRL1 | bHLH-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g14482 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g52771 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Solyc09g057710.4.1 | Solyc09g057710 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.03 | OrthoFinder output from all 47 species | |
Tin_g08817 | SPT | bHLH-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e005046_P003 | PIL5, PIF1,... | transcription factor (bHLH). PIF red/far-red light... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e006042_P001 | Zm00001e006042 | transcription factor (bHLH). transcriptional regulator (CIB) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | HCCA |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | HCCA |
MF | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006813 | potassium ion transport | IEP | HCCA |
BP | GO:0006914 | autophagy | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
MF | GO:0015079 | potassium ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
BP | GO:0030001 | metal ion transport | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | HCCA |
BP | GO:0061919 | process utilizing autophagic mechanism | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0071805 | potassium ion transmembrane transport | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
CC | GO:1902554 | serine/threonine protein kinase complex | IEP | HCCA |
CC | GO:1902911 | protein kinase complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
CC | GO:1990316 | Atg1/ULK1 kinase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR011598 | bHLH_dom | 424 | 469 |
No external refs found! |